| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1055 |
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| Symbol | |
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| ID | 3967849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1355883 |
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| End bp | 1356629 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920123 |
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| Product | tyrosyl-tRNA synthetase, class Ib |
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| Protein accession | YP_526529 |
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| Protein GI | 90020702 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.932424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAAC AAGAAATAAT TTTTGGCTTG CACGCGGTGC AGTCGCTACT TAAAGCAAGC
CCGCAGCGCA TACAAGAAAT TTGGATAGTA CGCGGTAGGC AAGATGCCAG GGTGCAAAAA
GTATTATCAG CTGCGCAGGC GGCAGGTATA AAAGTATTGC CGCAAGATAA AAAAAGCATG
GATTCAGTTT CCGCAGATGG CAATCATCAA GGTGTATTGG CCTATGCGAA AGAAGGGCAG
AGCTACACAG AAAATGATTT GTACCCGCTT ATCGAAGCCA TTGAGGGTGA CCCGCTAATT
GTTGTGTTGG ATGGCGTTAC CGACCCGCAT AATTTGGGGG CATGTTTGCG CTCTGCCGAT
GCCGCTGGAG CACACGCGTT AATAGTGCCA AAAGATAACT CCGTAGGCTT AACAGAAGTT
GCGCGCAAAG TGGCTTGTGG GGCCGCGGAT AATGTTCCGC TAATTGTGGT TACAAACTTG
GCGCGTTGCC TTAAAAAAAT GCAAGAGCAA GGCCTGTGGG TTGCAGGTAC AACCGGTGAT
ACAGATAAAA GTATTTACGA TGTGGATTTA ACCGGCCCGC GCGTAATAGT GATGGGCGCA
GAAGGCACCG GTATGCGCAG GCTTACCACG GAAACCTGTG ACGATTTGGT AAAAATCCCC
ATGTTAGGCA GTGTTACAAG CTTGAACGTG TCGGTAGCGA CAGGTGTGGT GTTGTTCGAG
GTAGTGCGTC AGCGACAAGC AAAATAG
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| Protein sequence | MVKQEIIFGL HAVQSLLKAS PQRIQEIWIV RGRQDARVQK VLSAAQAAGI KVLPQDKKSM
DSVSADGNHQ GVLAYAKEGQ SYTENDLYPL IEAIEGDPLI VVLDGVTDPH NLGACLRSAD
AAGAHALIVP KDNSVGLTEV ARKVACGAAD NVPLIVVTNL ARCLKKMQEQ GLWVAGTTGD
TDKSIYDVDL TGPRVIVMGA EGTGMRRLTT ETCDDLVKIP MLGSVTSLNV SVATGVVLFE
VVRQRQAK
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