Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0996 |
Symbol | |
ID | 3965121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1278410 |
End bp | 1278937 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637920063 |
Product | single-stranded DNA-binding protein |
Protein accession | YP_526470 |
Protein GI | 90020643 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000000269191 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCAAC GAGGTGTAAA TAAAGTCATT ATTGTTGGTA ATCTAGGGCA AGACCCAGAA ACCAAATACA CTGCCAGTGG CGCAGCAATT ACTAACGTAA GTATTGCAAC GTCAGAAACA TGGAAGGATA AGCAAACCGG TCAAGCGCAA GAGCGCACTG AATGGCACCG AGTAGTGTTT TTTAATCGCT TAGCGGAAAT TGCCGGCGAA TATTTACGCA AGGGCAGCAA AGTTTATATC GAAGGCGCTC TGCGTACACG CAAGTGGCAA GATCAAGGTG GCCAAGATCG TTACACTACT GAAATTGTCG CGAACGAGAT GCAAATGCTC GACTCTCGCG GTGGCAGCGA TGACAGTATG GGCGGCGGTT ATCAAAATGC CCCTAGTCGC CCAGCGCCTG CTCAAGCCCC TGCCCAGCAA GGTGGTGGTG CGCCAGCATA CGGCGGCGGT CGTCCACAGC CTGCTCCAGC CCCAGCTGCG CCTCCTGCGC CAGACATGGA CAGCTTTGAC GACGATATTC CATTCTAA
|
Protein sequence | MAQRGVNKVI IVGNLGQDPE TKYTASGAAI TNVSIATSET WKDKQTGQAQ ERTEWHRVVF FNRLAEIAGE YLRKGSKVYI EGALRTRKWQ DQGGQDRYTT EIVANEMQML DSRGGSDDSM GGGYQNAPSR PAPAQAPAQQ GGGAPAYGGG RPQPAPAPAA PPAPDMDSFD DDIPF
|
| |