Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0978 |
Symbol | rplO |
ID | 3966220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1253468 |
End bp | 1253902 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637920045 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_526452 |
Protein GI | 90020625 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00708309 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00387669 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTTTAA ATACTTTAAG TCCAGCACCT GGCCGCGTTT CTGCTAAGAA GCGTGTAGGT CGCGGTATCG GTAGTGGTTT AGGTAAGACT GCAGGCCGTG GTCACAAAGG TTTAAAATCA CGTTCTGGTG GTTCTGTTAA GCCTGGTTTC GAAGGCGGTC AGATGCCTTT GCAGAAGCGT CTACCTAAGT TTGGTTTTAC TAGCCGTATT TCTCGCGTAA CTGCAGAAGT TCGTTTAGCT GAGCTAAACA AAGTGGAAGC TGATATTATT GATATCGAAG CCTTAAGAGC TGCAGACTTG ATTGATAACA ATATCAAACG AGCCAAAGTA TTTCTTTCTG GCGAGTTAAC CAAAGCTGTT ACAATAAAAG GCTTGATGGT TACTAAAGGT GCTAAAGCAG CAATCGAAGC TGCTGGCGGA AAGATTGAAG AATAA
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Protein sequence | MRLNTLSPAP GRVSAKKRVG RGIGSGLGKT AGRGHKGLKS RSGGSVKPGF EGGQMPLQKR LPKFGFTSRI SRVTAEVRLA ELNKVEADII DIEALRAADL IDNNIKRAKV FLSGELTKAV TIKGLMVTKG AKAAIEAAGG KIEE
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