| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0973 |
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| Symbol | rpsH |
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| ID | 3966215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1251332 |
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| End bp | 1251724 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920040 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_526447 |
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| Protein GI | 90020620 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000165521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000973471 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTATGC AAGACCCTAT AGCCGATATG TTGACTCGCA TTCGTAATGC GCAGCAAGTA
GGCAAAACAT CAGTAACCAT GCCGTCTTCT AAGTTAAAAA AGAGCATCGC TGGTGTTCTT
AAAGAAGAAG GTTATGTTGG AGAGTTCTCT GTAAACGACG CTGCTAAAGC TGAGTTAACA
GTAGAGCTTA AGTATTTTGA AGGTAAGCCA GTTATTGCTG AGTTAGATCG TGTTAGCCGT
CCAGGTTTAC GCTCTTACGT TGGCAAAGAC GAACTACCTT CAGTTCGTGG CGGGTTGGGC
ATTGCTATTG TTTCAACCAG TAAGGGTGTT ATGACCGACC GTGCTGCTCG CGCTGCAGGA
GTTGGTGGTG AGATTCTCTG TACTGTCTTC TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNAQQV GKTSVTMPSS KLKKSIAGVL KEEGYVGEFS VNDAAKAELT
VELKYFEGKP VIAELDRVSR PGLRSYVGKD ELPSVRGGLG IAIVSTSKGV MTDRAARAAG
VGGEILCTVF
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