| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0971 |
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| Symbol | rplE |
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| ID | 3967686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1250520 |
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| End bp | 1250984 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920038 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_526445 |
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| Protein GI | 90020618 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000280468 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000101885 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAGATTC CTCGCATTAC TAAAATCACC CTAAACATGG GTGTTGGTGA GGCTCTTGCG
GATAAAAAAG TTTTAGAGAA CGCAGTAAGC GACCTAGAGA AAATCGCAGG TCAAAAAGCT
GTTGTTACTC GTGCAAGAAA ATCTATCGCG GGCTTTAAAG TTCGTGAAGG TTGGCCGATT
GGTTGTAAAG TAACTTTGCG CAGCGACAGA ATGTATGAGT TTCTTGATCG TTTGATCAGT
ATCTCCATTC CTCGTATTCG TGACTTCCGT GGTATTAGTC CGAAGCAGTT CGACGGACGC
GGTAACTTTT CAATGGGCGT GAGTGAGCAA ATCATATTCC CAGAGATCGA TTACGATAAA
ATCGATAAGC TGCGTGGTTT GGACATTTGT ATTTCAACAA CAGCTCGCAA CAATGACGAA
GGTCGTGCAT TGTTAAAAGC GTTTAACTTC CCGTTTAAAG GGTAG
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| Protein sequence | MEIPRITKIT LNMGVGEALA DKKVLENAVS DLEKIAGQKA VVTRARKSIA GFKVREGWPI
GCKVTLRSDR MYEFLDRLIS ISIPRIRDFR GISPKQFDGR GNFSMGVSEQ IIFPEIDYDK
IDKLRGLDIC ISTTARNNDE GRALLKAFNF PFKG
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