| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0968 |
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| Symbol | rpsQ |
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| ID | 3967683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1249390 |
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| End bp | 1249656 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920035 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_526442 |
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| Protein GI | 90020615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000132893 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000938527 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTGAAG CAAAAAAATT GGTACGTACG CTAACAGGTA AAGTTGTTAG CGACAAAATG
GAAAAGTCTA TCGTTGTTCT GATCGAGCGT CGAGTGAAGC ACCCCGTTTA CGGCAAGTAC
GTGAGTAAAT CTACTAAGAT GAAAGCGCAC GACGAAGCGA ACGATTGCAA AATTGGCGAT
ACCGTAACCA TCGCTGAGTC TCGTCCTCTA TCGAAAACAA AGTCTTGGAC TTTGGTTAAA
ATCGAAGAGC GAGCTACCCA GATATAA
|
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| Protein sequence | MTEAKKLVRT LTGKVVSDKM EKSIVVLIER RVKHPVYGKY VSKSTKMKAH DEANDCKIGD
TVTIAESRPL SKTKSWTLVK IEERATQI
|
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