| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0954 |
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| Symbol | |
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| ID | 3967669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1238684 |
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| End bp | 1239451 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637920021 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_526428 |
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| Protein GI | 90020601 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.709612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000169252 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGTAG CCATTGAACC TAAGAACCTA TCAGGCGGAC GGCTTTACCA GCGCGTCGCA
GAGCAACTCG CGGCAGTAAT TGCGGAAGGA GAATACCCTC CTGGCTCGCG CCTACCGGCT
GAACGAAAAC TAGCAGAACG CTTTGACGTA AGCCGCCCTA CCGTGCGCGA AGCCATTATC
GCACTAGAGC TGGCCGGCTG TGTAGAAGTA CGCGGCGGCT CTGGTGTATA CGTATCTGCC
GAAAGCAATA ACAACCTCTC ATCTGCTGAA TTTGCTGTTG GCCCATTCGA TATTCTCGAA
GCCCGAATCC TCGTAGAAGG AGAGGCGGCG GAGCTTGCAG CCAAGCGCAT TACCGACGAA
GAACTTGTCG AAGTGCGCGC AGCACTCGAA GCTATGGTGC AAGAAAACGA GCAGGAACCC
ATCTGCGAAA AAGCCGACCA GAACTTTCAT ATGCTTATTG CCCGTGCCAC CAAAAACGAA
GCAGTCGCAT CGGCCTGCGC CCACCTTTGG GCACTGCGCA ACAGCTCACC AGTGTCTGCC
CGCATCTTAG AAAAAGTGCG CCAGTCTGGC TCTAGACCAC GCATTGAAGA ACACCTTCTT
ATACTAGATG CACTTGAAAG ACGCGACCCA GAGGGCGCCC GTGACGCTAT GCGCGAACAC
CTTTCTCGCG TTATCCAGCA ATTATTAGAC GCCACCGAAG CAGAAGCAGT GGAAGAAGCC
CGTAGAAAAA TCGCATTTAA TCGCGAACGT TTTGGTATTT CTAAGTAA
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| Protein sequence | MNVAIEPKNL SGGRLYQRVA EQLAAVIAEG EYPPGSRLPA ERKLAERFDV SRPTVREAII
ALELAGCVEV RGGSGVYVSA ESNNNLSSAE FAVGPFDILE ARILVEGEAA ELAAKRITDE
ELVEVRAALE AMVQENEQEP ICEKADQNFH MLIARATKNE AVASACAHLW ALRNSSPVSA
RILEKVRQSG SRPRIEEHLL ILDALERRDP EGARDAMREH LSRVIQQLLD ATEAEAVEEA
RRKIAFNRER FGISK
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