| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0946 |
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| Symbol | |
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| ID | 3965341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1226359 |
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| End bp | 1227312 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920013 |
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| Product | SecY protein |
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| Protein accession | YP_526420 |
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| Protein GI | 90020593 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.409307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000724629 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACACAT ATGTATCCGC CATAGCACTA TTTATATTTT CAATTGCCTC GTCGTGTTGT
GTTGCCCAAA ACCCGCTCGA CTTTGGCAGT AATATTAAAA CCGCAGATCC GTCTGGCCAT
ATATGGGCTG ATGGCAGAAT GTACCTTTAC ACCTCGCACG ACCAAGAATG CCAAGAAGAT
TTTTATATGA AGGATTGGCA TACCTTTTCG TCCAGCGACT TAATAAATTG GACTGCCCAC
GGCCCAAGTT TATCTGTAGC GGATATTACG TGGGCAGATA ACTACGCATG GGCGCCCGAC
GCGGCCTATA AAAATGGGAA GTACTATTTG TTCTTTCCGG CGGGAACCGG TGTTAAAGAT
AGAGTAAACC CCGAAAAAAG CACTAAGTGG ATGGGCATTG GTGTTGCAGT AAGCGATAGC
CCTACAGGCC CCTTTAAAGA TGCGATTGGC GCCCCCTTGT GGACCGACCC CTATGCCAAC
GACCCAAGTA TTTTTATAGA TGATGACGGC AAGGGCTACT TATATTTTCA CGGTAAAGGT
GCAGACTACC TAGTAGCCGA AATGGCAGAC GATTTACTGA GTGTAAAAGG TGAGTTTCAC
AAAATGGATA TGGGCGGTTA CGAGCCAAAA ATGGAGGGCC CTTGGGTTTT TAAGCGCGAG
GGAATGTATT ACTTTACCAT GCCAGAAAAC AATCGTTCAC TTGCTTACTA TATGGCGAAA
TCTCCCTTTG GGCCGTGGGA ATACAAGGGC ATTTTTATGC AAGAAGAAGG CGGTAACAAC
CACCATTCTA TTGTGCAATT TAAAGGCAAG TGGATATTGT TTTATCACCG CTGGTTAATG
GGCGAAGGCG AGTGTAAAAA GAAGCAACGC CACACCGCAG CGGAATACCT TCACTTTAAT
GCCGACGGCA CAATTAAAGA AGTAAAAAGA ACGCGCGAGG GGTTAACTAA GTAG
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| Protein sequence | MYTYVSAIAL FIFSIASSCC VAQNPLDFGS NIKTADPSGH IWADGRMYLY TSHDQECQED
FYMKDWHTFS SSDLINWTAH GPSLSVADIT WADNYAWAPD AAYKNGKYYL FFPAGTGVKD
RVNPEKSTKW MGIGVAVSDS PTGPFKDAIG APLWTDPYAN DPSIFIDDDG KGYLYFHGKG
ADYLVAEMAD DLLSVKGEFH KMDMGGYEPK MEGPWVFKRE GMYYFTMPEN NRSLAYYMAK
SPFGPWEYKG IFMQEEGGNN HHSIVQFKGK WILFYHRWLM GEGECKKKQR HTAAEYLHFN
ADGTIKEVKR TREGLTK
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