| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0932 |
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| Symbol | |
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| ID | 3965573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1205133 |
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| End bp | 1206128 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919999 |
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| Product | ribosomal protein L22 |
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| Protein accession | YP_526406 |
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| Protein GI | 90020579 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00199483 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00633944 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATCT TTAGTAGTAA TACCTCTCGA ATTCTAAATG CACTTCTTGT TCTCTGTTTT
GTATGGCTGC TTAGCGCATG TACGGCGAAG AGTGAAGTTG AAGTGCTCAA AATGGCGCAC
AGCTTGCCAA CCGATCATCC CGTGCATGAA GCTATTATGT ATATGGGGGA GCGCTTGCGA
GTGCTATCCG ACGGCAAGAT GGATTTACAG GTCTACCCTG GTGGTCAGTT GGGCGGCGAG
CGCGAGCTAA TTGAGTTATT GCAAATAGGT AGCTTAGCAA TGACTAAGGT GTCTTCCAGC
CCTATGGAAG GTTTTGTTCC CGAAATGAAA GTATTCAGTA TGCCTTATGT GTTTCGCGAT
AGTGAGCATT ACTGGCGTGT GCTCGATAGC GAGCTAGGTA AAGAGCTGTT GCTATCTGGG
GAAAAAGTAA GGCTGCGCGG TTTGGGTTAC TACGATGCTG GTAGCCGCAG CTTTTACACT
GTGAAAAAGC CAATTTACAA GCCCGAAGAT TTAAAGGGCT TAAAAATACG TGTGCAAAAA
AGTCAAACGT CTCTACAGAT GGTGCGCGCT TTAGGCGGTG CTGGCACGCC AATTTCTTGG
GGTGAGCTAT ACACTGCGCT AGATCAAGGT GTTGTAGATG GCGCCGAAAA TAACCCTCCT
AGTTTTTATA CTTCTGGTCA TTACGAGGTT GCCAAGTACT ACACTTTAAA TGAGCACACC
TTTGTACCAG ATATTGTGCT GATTAGTACC TACGTGTGGA ACAATCTTAC GCCACAGCAG
CAGGAGTGGG TGCAGCAGGC TATGGACGAG TCGGTAGTGT TTGAACGCAA AGCTTGGGCA
GACGCTACAG CGCACGCGTT GGCAGAAGTG GAAAAAGCAG GCGTGAAAAT TATTCGGCCA
GATAATTCGC TCTTTGCAGA AAAAGTAAAA GCAATGCATG AGGCAGCGAA AGGCACGCCT
GCTCACGATC TTATGCAAGC CTTTGGCAAA CTATAG
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| Protein sequence | MAIFSSNTSR ILNALLVLCF VWLLSACTAK SEVEVLKMAH SLPTDHPVHE AIMYMGERLR
VLSDGKMDLQ VYPGGQLGGE RELIELLQIG SLAMTKVSSS PMEGFVPEMK VFSMPYVFRD
SEHYWRVLDS ELGKELLLSG EKVRLRGLGY YDAGSRSFYT VKKPIYKPED LKGLKIRVQK
SQTSLQMVRA LGGAGTPISW GELYTALDQG VVDGAENNPP SFYTSGHYEV AKYYTLNEHT
FVPDIVLIST YVWNNLTPQQ QEWVQQAMDE SVVFERKAWA DATAHALAEV EKAGVKIIRP
DNSLFAEKVK AMHEAAKGTP AHDLMQAFGK L
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