| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0899 |
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| Symbol | |
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| ID | 3965496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1162323 |
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| End bp | 1162922 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637919961 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_526373 |
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| Protein GI | 90020546 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0655] Multimeric flavodoxin WrbA |
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| TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000786086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCCACGC CCTACGTACT TATACTGTAT TACAGCCACA AAGGTTCAAC TAAACAACTT
GCCTCGGCAA TTGCTAGAGG GGTTGAGCAG GCTGGAAACA TAGAAGCGCG TTTGCGCACA
GTGCCAAAAG TTGCCCCTGT AACGCAAGTT GCAGAACCTG CCATACCCGA CGACGGCGAC
CTGTATTGCA CTGAAGACGA CCTCATCAAC TGCGCAGGCC TTGCCCTAGG CAGCCCTACC
CGCTTTGGCA ATATGGCGGC ACCGTTAAAA TACTTTTTAG ACGGCACAGC CACCCAATGG
GTAAACGGCC AATTAATCGG CAAACCAGCG GGTGTTTTTA CTTCTACGTC GTCGATGCAT
GGCGGTCAAG AATCTACGCT GTTATCGATG ATGGTGCCCC TACTGCATCA CGGCATGGTG
TTATGCGGTA TTCCCTACGC CGAGCAAGCA TTACATACCA CCGCAACTGG CGGCACACCT
TACGGGCCAT CGCACCTTGC TGGCAGCGAT GGCACCACAC AACTAAGCCA AGAAGAAAAA
GCCCTGTGCG TAGCCTTTGG CAAACGCCTA GCCACCCTAG CGAAAAAACT CTATGACTGA
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| Protein sequence | MPTPYVLILY YSHKGSTKQL ASAIARGVEQ AGNIEARLRT VPKVAPVTQV AEPAIPDDGD
LYCTEDDLIN CAGLALGSPT RFGNMAAPLK YFLDGTATQW VNGQLIGKPA GVFTSTSSMH
GGQESTLLSM MVPLLHHGMV LCGIPYAEQA LHTTATGGTP YGPSHLAGSD GTTQLSQEEK
ALCVAFGKRL ATLAKKLYD
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