Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0889 |
Symbol | |
ID | 3965486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1148014 |
End bp | 1150992 |
Gene Length | 2979 bp |
Protein Length | 992 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919951 |
Product | ferrienterochelin/colicin outer membrane receptor |
Protein accession | YP_526363 |
Protein GI | 90020536 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000114339 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000138215 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAATAACC TAAAGGTTAA GCCGCTGGCT CTTGCCATTG CTCTGGGCTT GTCTCCTTCG GCACTAGTTT ATGCGCAGTC CGATAGCTCG GCAGACGCGC AGCTAGAAGA AGTGATTGTG ACCGGTGTTA AAGCCGCGGA TCTAAACGCC CGAGAAGCAG AGCGCAGTAA AGACGCGTTC AGCTCGATTA TCTCTCAAGA TGACGCCGGC AACTTCGCCG ACCAAAACGT TGCAGAATCG CTACAGCGTT TGCCCGGTAT TACCTTGCAA AAAAGTGAAG GTGAAGGGCG CTACGTAAAC GTACGTGGTT TGGGGGCAGA TTTCGTATCG GTCACCATGA ACGGTTCTGA ATTGGCATCA GGTGGTGGCG ACGGTCGCGC CTTTGCTCTG GATGCAATTC CAGCTGATAT GCTTGGCTCT ATAGAGGTGT ATAAGTCTCT CACTCCAGAT CAAGATTTGA ACTCTATTGG CGGTACGGTA AACGTTAAAA CAGTTTCAGC CTTCGATAAA AAACGTGACA CTCTTAAATT AAAAGCTCAA GTTAATAACC AGGTGTACAA AGATCAGTTA TCGCCTAAGA TTTCTTTGTC TGGTACTAAT TTATTGTTTG ATGATCGCAT AGGTATTGGC TATTCCGTGT CTACCGAGCA GCGGAACTCT GTGAACTATG AAGTTCGTCA TCATTCGACT ACAGATGCAC GTTATATCAC AAATGGTAAT ACCACAGCTT TGGTTCCTTA TCAGTTTGAG GCGAAGCAAG AGGAAGGGGA GCGTACTCGT AATGCGGCCT CTTTAGATAT TGGTTTCCGC CCCACAAATA ACAGCGAATA CTATTTACGT TTAAGCCACA CCTCATATCA AGATTTGGAC GTGGCACTAC GAGAGTACAG CCGTTTTGAT ACATCCAGTG CAAGTGAATT TGTATTGCTG GATGTAGAAA ATAAGATCAT GGGTGCTGCT GGCACCGAAC TACAGCATCA GTTCTTTATA CAGGATGGCG TAGCTACTAC AGACTCCGTA GCTATTGGTG GTAAAAACAA TTTTGATAAT GGCTGGGAAA TAGAATACGA CCTGTCTGTA TCCAAAGGAG AGTGGGATAA GCCCGGTGCT TCTCGTGTTC AATTTCGAGC GCGTGATATG CCTATGATTG GTGGCTGGGG GCCAAATTAT CTTTGGAGTA TGCCAATTGA ACGTGACCAC TTAGAGTATC TTGCTGGGGT GGATCAGGTG CTGAGTAACG CACCTTATAA CTATGGTTCT CGTCAGCAAC CTGACATGGG TTTTGATAAC CTTTTTATCG AAGATAGTTT CCGTACTGAT GATGTTAGTC AGCTTAAAAT TGACATCAAA AAAGAATTTG AAACCGGCAA GATTAATTAC ATTAAATTTG GTGGCACGGT TAAAAATCGA GAGCGCGATC GAAACAAAGA TCGCTGGAGT GTAATTCCTT CGGATAAGGC TTCTATCGGT TGTCCCGCGG CTGAAGATCC AGAGTTGTGT TTTGATTTGG CGTCGTCTGA ATTAGGTGAT TTCGAAACAT TTGAGCCGGC CCATGCGGAC ATCCGTCATA ACTTCATAAC TTACGATGAT GCTCGGTACC TTATCGACGC TACTAAAACG GCGGCAACAG AGTTCGATAA GAACAATAAC GATCAAGATA GCGTTAAAGA CGATTATGTT CTTACTGAAG ACGTACAAAA TATTTATTTA ATGGCGGAAT TTGCCACTTC AGATAACTCT ACGTTAATCG TTGGTGGTAA ATACGAAACA ACTACGTTCG ACTCTACCGG AAACTTTTCT ATACGTTGGG ATAGAAACGA AGATAGTTCG TCGGCGACTT CCGACGATAT TGTTGTGCCG TTGACAAATA CCCAGACGAC ATACAGTGAC TTTCTGCCAA GTATTCACTG GAAGTATGAG CCTCGCGACG ACTTGCTCGT GCGTGCTGCC CTTTGGACTA GTTTCACCCG TCCAAATTTC TCAGATTCAC GTGCGTCAGT TGAATTTAGT GGTCGGGTAA TACTGTGCGA TGCTAATGCT GTCGAAGAAA CTTCTTTGAC TTGTGATGAT CGCCCTACTG ACTTAAATAG TGCTTGGAGC TCGGATGAGG CCGTTAAGGC AAACACTGTT ATAGGTAAGG CGAATACCTT AAAAATAGGT AACCCGTCTT TGAAGGCTCA ATACGCCACA AACTTGGATA CCTCTTTAAC TTGGTATGCG AGTGATGACC TGTACTTCCA GGCTGCATTA TTTGCCAAGC AAATTGATGG TTTTATTGCA GAGGTTCGCG GGCAGGAAAT GAGCTTGGAA GATCTGCCGT TTTATGTTCC GGTTGAGACG ATTAATGAAA GCTCTCCTGC GTTGAACTTA ATACCAGGAA AGGTTTATGA CGATGTAAAC ATGAGCATTA ACGGCGAAGT GGCCCACGTT TATGGTCTTG AATTGACCTA CTCTCAATAC TTCAATAGCG GTTTGTTTAT ACAGAGTAAC GCTACTTTTA TCGGTAGTAG TGCTGATGTA GGTAGTACCG TTCGCGAAGA TAAAATTGCC TTGCCATTCC AAGCGGATGA GACCCTTAAC CTAACGGTAG GTTGGGAGAA CGACGACGTT TCTGTACGTT TGATTGGCAA CTATCGCAGT GCCGTACTTG AGCAAATAGG TAGTTGTACC GCTGCCAATA AAGCTCAAGA TATCGCTGAT GCTGCTGCAC GAGCTGAGGC TGGTGGTAAT GGTGCAATCA TTCCTGAAAG TTGTAAAAAG TGGGCCGACG TTTACGAAGA CAACACCTTT GGTTTGGACT TTAAGGCAAC GTGGAAAGTC ACCGATATGA TTGGCGTCTA TTTTGATGCG CTAAACCTAA CTGGTGATCG TTCAGTTCGC TACTACACGG GAAATGAATA CAGCAATGGG AAAATGATGT ACAGCGGTGA AGATTTTGGT ACCTCATTCC AGTTGGGCGT TAACGTGAAA ATTATGTAA
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Protein sequence | MNNLKVKPLA LAIALGLSPS ALVYAQSDSS ADAQLEEVIV TGVKAADLNA REAERSKDAF SSIISQDDAG NFADQNVAES LQRLPGITLQ KSEGEGRYVN VRGLGADFVS VTMNGSELAS GGGDGRAFAL DAIPADMLGS IEVYKSLTPD QDLNSIGGTV NVKTVSAFDK KRDTLKLKAQ VNNQVYKDQL SPKISLSGTN LLFDDRIGIG YSVSTEQRNS VNYEVRHHST TDARYITNGN TTALVPYQFE AKQEEGERTR NAASLDIGFR PTNNSEYYLR LSHTSYQDLD VALREYSRFD TSSASEFVLL DVENKIMGAA GTELQHQFFI QDGVATTDSV AIGGKNNFDN GWEIEYDLSV SKGEWDKPGA SRVQFRARDM PMIGGWGPNY LWSMPIERDH LEYLAGVDQV LSNAPYNYGS RQQPDMGFDN LFIEDSFRTD DVSQLKIDIK KEFETGKINY IKFGGTVKNR ERDRNKDRWS VIPSDKASIG CPAAEDPELC FDLASSELGD FETFEPAHAD IRHNFITYDD ARYLIDATKT AATEFDKNNN DQDSVKDDYV LTEDVQNIYL MAEFATSDNS TLIVGGKYET TTFDSTGNFS IRWDRNEDSS SATSDDIVVP LTNTQTTYSD FLPSIHWKYE PRDDLLVRAA LWTSFTRPNF SDSRASVEFS GRVILCDANA VEETSLTCDD RPTDLNSAWS SDEAVKANTV IGKANTLKIG NPSLKAQYAT NLDTSLTWYA SDDLYFQAAL FAKQIDGFIA EVRGQEMSLE DLPFYVPVET INESSPALNL IPGKVYDDVN MSINGEVAHV YGLELTYSQY FNSGLFIQSN ATFIGSSADV GSTVREDKIA LPFQADETLN LTVGWENDDV SVRLIGNYRS AVLEQIGSCT AANKAQDIAD AAARAEAGGN GAIIPESCKK WADVYEDNTF GLDFKATWKV TDMIGVYFDA LNLTGDRSVR YYTGNEYSNG KMMYSGEDFG TSFQLGVNVK IM
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