| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0884 |
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| Symbol | |
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| ID | 3968818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1141943 |
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| End bp | 1143586 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919946 |
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| Product | chaperonin, 60 kDa |
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| Protein accession | YP_526358 |
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| Protein GI | 90020531 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000145695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000472619 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAAA TTGTAAAGTT TGGTGACGAA GCCCGTCAAA AAATGTTGGC TGGTGTAAAT
GTCTTGGCCG ACGCTGTAAA AACTACCTTA GGCCCTAAAG GTCGCAACGT AGTATTAGAT
AAGTCTTTTG GTGCACCGAC TGTAACTAAA GATGGTGTAT CTGTTGCGAA AGAAATCGAA
TTAGAAGATA AATTCGAAAA TATGGGCGCA CAAATGGTTA AAGAAGTAGC CTCTAAAGCG
TCTGACGATG CTGGTGACGG TACTACTACT GCAACCGTAT TGGCTCAAGC CATTGTTAAC
GAAGGCCTAA AGTCCGTTGC TGCTGGCATG AACCCAATGG ATTTAAAGCG CGGTATCGAC
AAAGCTGTTA ACGCTGCTGT TGCTCACATC AAATCTATCG CGCAACCATG TGAAGATGGC
AAGTCAATCG CTCAGGTTGG TACTATCTCT GCAAACAGCG ATTCTCACGT TGGCGACATC
ATTGCAGAAG CAATGGCCAA AGTGGGTAAA GAAGGCGTTA TTACTGTAGA AGAAGGTAGC
GGCTTAGAGA ACGAATTGGA CGTAGTAGAA GGTATGCAGT TTGACCGCGG TTACCTTTCT
CCTTACTTCA TCAACAACCA AGAAAGCATG AGCGTTGAAA TTGAACAGCC ATACATTCTG
CTTGTTGATA AAAAAATCTC TAACATTCGC GAATTGTTAC CAGTATTAGA AGCTGTTGCT
AAGTCTGGCA AGCCATTGGT TATTGTTGCT GAAGACGTAG AAGGCGAAGC ATTAGCTACT
TTGGTTGTAA ACAACATGCG CGGTATTGTT AAAGTGACTG CGTGTAAAGC ACCTGGTTTT
GGCGACCGTC GCAAAGCGAT GTTGCAAGAT ATTGCAATCT TAACTGGTGG TACCGTAATT
TCTGAAGAAG TGGGCTTAGA TCTAGAAAGC GCTACTTTGG AGCACTTAGG TTCTGCTAAG
CGTGTAACCA TGACCAAAGA AAACAGCACT ATCGTTGATG GCGCAGGCGT TGCTGCAGAT
ATCGAATCTC GTGTTGCTCA AATTCGCGCG CAAATCGAAG AAACTTCTTC TGATTACGAT
CGTGAAAAAC TTCAAGAGCG TGTTGCTAAG CTTGCTGGCG GTGTTGCCGT TATTAAAGTT
GGCGCCATGA CCGAAGTTGA AATGAAAGAG AAAAAAGCAC GCGTAGAAGA TGCGTTACAC
GCAACACGCG CTGCGGTTGA AGAGGGTGTT GTACCTGGAG GCGGTACTGC GCTTATCCGT
GCAGCAGCGG CAATTGCCGA CCTTAAAGGC GACAACGAAG ACCAGAACGC TGGTATTGGT
ATTGCTATCC GTGCTCTTGA AGCGCCATTG CGTCAAATCG TTTCTAACGC TGGCGGCGAA
GCGTCTGTTG TTGCAGATAA AGTTAAAAAC GGCGAAGGCA ACTTCGGCTT TAACGCGGCA
TCTGGCGAAT ACGGCGATAT GCTTGAGTTT GGTATTCTTG ACCCAGCTAA AGTTTCGCGC
ACTGCCATTC AAGCTGCAGG CTCAATTGCC GGCTTGATGA TCACCACCGA AGCAATGATT
GCTGACAAGC CTTCTGAAGG CGGCGCTGCT GCACCAGACA TGGGTGGCAT GGGTGGAATG
GGCGGCATGG GCGGCATGAT GTAA
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| Protein sequence | MAKIVKFGDE ARQKMLAGVN VLADAVKTTL GPKGRNVVLD KSFGAPTVTK DGVSVAKEIE
LEDKFENMGA QMVKEVASKA SDDAGDGTTT ATVLAQAIVN EGLKSVAAGM NPMDLKRGID
KAVNAAVAHI KSIAQPCEDG KSIAQVGTIS ANSDSHVGDI IAEAMAKVGK EGVITVEEGS
GLENELDVVE GMQFDRGYLS PYFINNQESM SVEIEQPYIL LVDKKISNIR ELLPVLEAVA
KSGKPLVIVA EDVEGEALAT LVVNNMRGIV KVTACKAPGF GDRRKAMLQD IAILTGGTVI
SEEVGLDLES ATLEHLGSAK RVTMTKENST IVDGAGVAAD IESRVAQIRA QIEETSSDYD
REKLQERVAK LAGGVAVIKV GAMTEVEMKE KKARVEDALH ATRAAVEEGV VPGGGTALIR
AAAAIADLKG DNEDQNAGIG IAIRALEAPL RQIVSNAGGE ASVVADKVKN GEGNFGFNAA
SGEYGDMLEF GILDPAKVSR TAIQAAGSIA GLMITTEAMI ADKPSEGGAA APDMGGMGGM
GGMGGMM
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