Gene Sde_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0842 
Symbol 
ID3965799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1093152 
End bp1094858 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content49% 
IMG OID637919904 
Productpeptidoglycan synthetase FtsI 
Protein accessionYP_526316 
Protein GI90020489 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA CAAAGCAAAT AGCTAAATGG CGAATGATGT TAATGGGTGG GGCGCTTTGC 
GCTCTGCCCA TTTCGCTTAT TTGGCACTTG GCAAATTTGC AGCTTATTCC CGGTGACGAT
AAGGATTTTC GCTTTTTGCA AAGCGCGGGT GATGCGCGCA CTTTGCGCAG TCAGGTAATA
CCTGCGTACC GCGGTGTCAT TACCGATCGC AATGGTGAAT TGCTTGCGGT GAGCACGCCG
TTAACGTCCA TTTACGTTAA CCCACAGCAG CTAAATAGCG AGCAGGGCCC TGCGTTGGCT
AAAGCAATGG GTATTAGCCA TAGCGAACTG AAAAAGCGTT TAAAAAATTA CGAAAACAAA
CAATTTATGT ATTTGGAGCG GCATCTGCCA CCGCATAAAG CAGAGCCAAT TCTTGCGCAC
AAATTTAAAG GGGTTTACTC CGAGCAGGAG TACCGTCGTT ATTACCCCGC CGGTGAGGTA
ACTGCTCACA TCATTGGCTT TACTGATATT GAAGATCAGG GCCAAGAGGG CGTAGAGCTA
GCCTATAACC AATGGCTTGC TGGTGTGCCG GGTGAAAAGC GCCTAGTAAA AGATTTGAAA
GGCAATGTAG TAAAAGAAGT GGGAATGGTG CGCGCGCCAG CCACGGGTAA ACCATTGCAA
TTAAGTATCG ATCTGCGTTT GCAATATCTG GCCTATCGCG AGCTTAAAGC TGCGGTAGCA
GAGCAAAAAG CGCGTGCGGG TTCATTGGTA ATGTTGGATG TGGAAACCGG CGAAATATTG
GCCATGGTTA ATCAGCCATC GTACAACCCA AACGATCGAA CCAAATTAGT ACCAGCGCAA
TTGCGTAATC GCGCTTTAAC GGATGTGTTT GAGCCGGGCT CTACCATGAA GCCACTTACC
ATGATGGCGG CATTGGAAAC GGGGCGCTAC CCGTTTAATC ACACAATCAA TACCAGCCCT
GGGTATATCC AAGTGGGCAG TAAAACATTG TTAGACCCGC GCGATTACGG CGTTATGGAT
CTAACCAAAA TTATTACTAA ATCCAGTCAA GTAGGTATAA CCAAGCTGGC GTTAGAAATG
GATGCAGAAA CCATTCGCAA TATGTTTGCG CGAGCAGGGC TTGGGCAAAG CACTGGGTTG
GGGTTCCCCG GTGAAAGCGT GGGTGTTTTG CCGTCGCGCA CAAAGTGGCG ACCAATTGAG
CACGCGAACT TATCGTTTGG CTACGGGTTA AATTTAAATG CGGTGCAACT AGCACAGGCT
TACAACATGA TTGCAGCAGG CGGGGAGTTC AAGCCTGTTA GTTTGGTTAT GCAAAGCGAA
GCTCCGTATT CGCAGCGAGT GGTGTCTGAG CGGGTAACGT CTCAAATAAC CACAATGCTA
AAAACGGTAA CGCAGCAGGG TGGCACCGCA ACGCGTGCGC AAATTCCAGC GTTCCCTGTT
GCAGGCAAAT CGGGTACCGC GCATAAAACT GAAAATGGCG GTTATGCGGA TGATCGTTAC
CGAGGTTTTT TTGCTGGGTT CGCACCGGCA GATAACCCAA AAATTGTTGC GGTAGTGGTT
ATTGATGAGC CGTCCAACGG TAAATATTAC GGTGGTGAAT CTGCTGCGCC GGTATTTGCA
AAGGCGGTTG GTGGTGCATT ACAAGTTTTG CGCGTACCGC CGGTTAATCG CGAAGAATAT
TTAGCCGCTG TGGAGTTGCA GCCATGA
 
Protein sequence
MKQTKQIAKW RMMLMGGALC ALPISLIWHL ANLQLIPGDD KDFRFLQSAG DARTLRSQVI 
PAYRGVITDR NGELLAVSTP LTSIYVNPQQ LNSEQGPALA KAMGISHSEL KKRLKNYENK
QFMYLERHLP PHKAEPILAH KFKGVYSEQE YRRYYPAGEV TAHIIGFTDI EDQGQEGVEL
AYNQWLAGVP GEKRLVKDLK GNVVKEVGMV RAPATGKPLQ LSIDLRLQYL AYRELKAAVA
EQKARAGSLV MLDVETGEIL AMVNQPSYNP NDRTKLVPAQ LRNRALTDVF EPGSTMKPLT
MMAALETGRY PFNHTINTSP GYIQVGSKTL LDPRDYGVMD LTKIITKSSQ VGITKLALEM
DAETIRNMFA RAGLGQSTGL GFPGESVGVL PSRTKWRPIE HANLSFGYGL NLNAVQLAQA
YNMIAAGGEF KPVSLVMQSE APYSQRVVSE RVTSQITTML KTVTQQGGTA TRAQIPAFPV
AGKSGTAHKT ENGGYADDRY RGFFAGFAPA DNPKIVAVVV IDEPSNGKYY GGESAAPVFA
KAVGGALQVL RVPPVNREEY LAAVELQP