Gene Sde_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0807 
Symbol 
ID3966406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1053551 
End bp1053868 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content49% 
IMG OID637919869 
Productmethyltransferase 
Protein accessionYP_526281 
Protein GI90020454 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.792311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.964026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAG CGGACACGCT AATGACAGAA CGAGCCAACC CTTTCAGCGC ACCTGCTCAA 
CCTGCCGAGG AAAGCACTCA ATTGCCACAA GGACAATCCT TGCGTGATTG TGTAGAGAAA
TCCGTTAACA ATTACTTCCA GCACCTAGAC GGCCAGGATG TTTCCGACGT ATACGAAATG
GTACTCGCGG AAGTAGAAGC CCCCATGCTA GAAGTTGTAA TGAAATACAC TCGCCACAAT
CAAACCAAAG CCGCGCAGGT ATTAGGCTTG AACCGCGGCA CGCTGCGTAA AAAATTAAAG
CAATACGGGC TACTGTAA
 
Protein sequence
MNTADTLMTE RANPFSAPAQ PAEESTQLPQ GQSLRDCVEK SVNNYFQHLD GQDVSDVYEM 
VLAEVEAPML EVVMKYTRHN QTKAAQVLGL NRGTLRKKLK QYGLL