| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0764 |
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| Symbol | |
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| ID | 3966208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 985837 |
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| End bp | 988584 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919826 |
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| Product | assimilatory nitrate reductase (NADH) alpha subunit apoprotein |
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| Protein accession | YP_526238 |
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| Protein GI | 90020411 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.136894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC AAAAGTCTCA ACTTGCAAAC GTAATCGCTT CCGATAACCG TGCCGATATT
GCAAGCAAAA CCGTAAAAAC CACTTGCTGC TACTGCGGCG TTGGTTGTGG GGTAGAAGCC
ACCGTAGAAG ATAATCGCGT TACCGCTGTT AAAGGCGATG AGCTGCACCC AGCCAATTTG
GGCCGCCTAT GTGTGAAGGG GTCTTCGTTA CACGAAACAC AAAGTAACCC CAATCGTTTA
CTGCAACCCA TGTTGCATGG CGAAGCAACA GATTGGGAAA CAGCCCTAAA TTACAGTGCC
GATAAATTTA AAGCGATCGT TGAACAATAC GGCCCAGAAT CTGTAGCGTT TTATTTATCC
GGCCAATTAC TTACCGAAGA TTACTACGTT GCCAATAAGC TAATGAAAGG GTTTGTTGGC
ACTGCGAATA TCGATACTAA CTCGCGCCTG TGTATGGCTT CGGCGGTTGT TGCCCATAAG
CGCGCATTTG GTGGCGACGT GGTGCCGGGC AATTATGAAG ACTTAGAAAA CACCGATTTA
GTTTTACTTG TAGGCTCTAA TACCGCTTAC GCCCACCCAA TTATTTATCA GCGCATAGTG
AAGGCCAAAG CAGCGCGGCC AAACATGAAA GTTGTGGTTA TTGATCCGCG TCGCACGGCC
ACCTGTGATA TTGCCGATTA CCATCTCGCT ATACGCCCCG GCTCGGATGC CTTTTTGTTT
AATGGGTTGC TTGGTTACTT GGCTGATAAT AACGCGCTAG ACAGCGAATT TATTGCCAAC
CATAGCGAAG GTTTTGACGA AGCCTTAAGC GTTGCCAAAG CGCAGGTTGC CAGCGTAGAG
CAAGCCGCAG TAATGTGCGA TGTAGCAAAA AATGATTTGA CTGCAGTGTA TGATTTATTT
GCCAAAACAA CTAAAGCGGT TACGGTATTT TCGCAGGGCG TTAATCAATC TTCTTCTGGG
GTAGATAAAG GCAACACGAT AATTAACTGC CATTTAGCCA CGGGTAAAAT AGGCAAGCTA
GGCGCAGCAC CGTTTTCTAT TACTGGGCAG CCCAATGCGA TGGGTGGCCG CGAAGTGGGC
GGCTTAGCTA ATCAGCTTGC TGCACATATG AGTTTTGATA ACCAACCCGA TATAGATCGT
GTGGCCAGCT TTTGGCGGGC ACCCAATATG GCGCAGGGTG AAGGTTTAAA AGCGGTAGAT
ATGTTTCAAG CCGTACACGA TGGCAAAATA AAAGCCATTT GGATTATGGC GACTAACCCC
GTTGTAACCA TGCCGGATGC AAACTTTATT CGCGAGGCTT TAGAGAAATG CGAGCTGGTA
TTGGTGAGCG ATTGTATAGC CAATACCGAT ACAGGCAAGC TGGCCGATGT GGTGTTTCCC
GCAACCACAT GGAGCGAGAA AAACGGTACG GTTACTAACT CTGAGCGCAG AATTTCTTTA
CAAAAAGGGT TTTTGCCCGC ACCTGGCCAA GCAAAGCACG ATTGGCAAAT AATCAGCGAG
TTCGCACAAA AAATCGGTTT TGAGCAGGCG TTTAATTACA CGCACCCTGT AGAAATATTT
CGCGAGCACG CTGCGCTTTC TGGGGTAGAT AACGGTGTAG ATGTTGGCAC TAATACGCGC
CCTGTGCGTG GTTTTGATAT TTCTGGTATG CAGCACATTA GTAAGCAGGC GTATGAAAAC
CTGCAGCCCA TTCAATGGCC CGTAAATAGC CATAAGCCAA ATGGCACCGC GCGCTTGTTT
GAAGACGCTA ATTTTTTTAC TGCCAGTGGC CGCGCTAAAT TTGTACCTAT TAGTGCGCGC
TTCCCACAAA TGCCGCCGAA AGATAACCAA GTTATTATGA ACACTGGCCG TATTCGCGAC
CAGTGGCACA CCATGACCCG CACCGGCAGC GCCGCAAAAT TATTGGGCCA TATCGATGAG
CCATTTATCG ATATTCACCC GGCAGACGCC AAGCGTTTTG GTTTAGCGCA TAAAGATATT
GCTGTGTTAG AAAATCGCGG CGCGCGTTAT TTAGGCCGCG TAAATGTAAG CGACAGTCAG
CGCGTGAGTG AAGTTTTTGT GCCAATGCAT TGGAACGATA ATTTTGCATC CAGCAGTCGA
GCCGATGCGT TGGTAAACGC AATTACCGAC CCTCTGTGTG GGCAGCCGGA ATTTAAACAT
AGCCCCGTAG AAATTAACCC CTATAACGCG CAGTGGAGTG GATTTATAGC GAGTGAGTTA
CCGGTTACGC CAAACGCTGA TTATTGGGTG AAAATTCCAG TCGACAAGGG ATACAAGTAT
CGAATAGCCG ACACGGTTAC CCCTAGTAAT TGGAGTGAGT GGTTAACGGA GCAATTTCCG
TTGGTGAGTG ATTGGGTAGA GCTTACCGAT TCTAGCCAAG CGTTTTATCG CAAAGTAGGT
TTTATTGAGG GGCGCTTGGC GGTTGTGTTG AATATTGCGC GTGGCAATGA GCAACCTATA
GAAAACCGCT GGCTAGAGCA GCAATTGGGC GAGCAGTGCG ATTTAAATCA GCGCTTTGCG
GTACTGGCGG GTGTGGCTGG TGAGGGCGTA GAAGATGAAG GCCCGATAGT GTGCTCGTGT
TTTCAAATTG GTGCCAAAGC AATTCAAACA GCGATTGAAG GCGGTTGTTG CAGCGCCGAA
GCCCTAGGCG AAAAATTAAA GTGCGGCTCT AACTGCGGCT CTTGTATTCC TGAGATTAAC
GGTATGATAC GAGCGTTTTC GCCACAGCAT GCAGCGAAGC AGGCGTAG
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| Protein sequence | MTVQKSQLAN VIASDNRADI ASKTVKTTCC YCGVGCGVEA TVEDNRVTAV KGDELHPANL
GRLCVKGSSL HETQSNPNRL LQPMLHGEAT DWETALNYSA DKFKAIVEQY GPESVAFYLS
GQLLTEDYYV ANKLMKGFVG TANIDTNSRL CMASAVVAHK RAFGGDVVPG NYEDLENTDL
VLLVGSNTAY AHPIIYQRIV KAKAARPNMK VVVIDPRRTA TCDIADYHLA IRPGSDAFLF
NGLLGYLADN NALDSEFIAN HSEGFDEALS VAKAQVASVE QAAVMCDVAK NDLTAVYDLF
AKTTKAVTVF SQGVNQSSSG VDKGNTIINC HLATGKIGKL GAAPFSITGQ PNAMGGREVG
GLANQLAAHM SFDNQPDIDR VASFWRAPNM AQGEGLKAVD MFQAVHDGKI KAIWIMATNP
VVTMPDANFI REALEKCELV LVSDCIANTD TGKLADVVFP ATTWSEKNGT VTNSERRISL
QKGFLPAPGQ AKHDWQIISE FAQKIGFEQA FNYTHPVEIF REHAALSGVD NGVDVGTNTR
PVRGFDISGM QHISKQAYEN LQPIQWPVNS HKPNGTARLF EDANFFTASG RAKFVPISAR
FPQMPPKDNQ VIMNTGRIRD QWHTMTRTGS AAKLLGHIDE PFIDIHPADA KRFGLAHKDI
AVLENRGARY LGRVNVSDSQ RVSEVFVPMH WNDNFASSSR ADALVNAITD PLCGQPEFKH
SPVEINPYNA QWSGFIASEL PVTPNADYWV KIPVDKGYKY RIADTVTPSN WSEWLTEQFP
LVSDWVELTD SSQAFYRKVG FIEGRLAVVL NIARGNEQPI ENRWLEQQLG EQCDLNQRFA
VLAGVAGEGV EDEGPIVCSC FQIGAKAIQT AIEGGCCSAE ALGEKLKCGS NCGSCIPEIN
GMIRAFSPQH AAKQA
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