| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0758 |
|---|
| Symbol | |
|---|
| ID | 3966202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 977084 |
|---|
| End bp | 977734 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637919820 |
|---|
| Product | putative ubiquinone biosynthesis protein |
|---|
| Protein accession | YP_526232 |
|---|
| Protein GI | 90020405 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2941] Ubiquinone biosynthesis protein COQ7 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.276204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATG CTGCCGCATC TAGAAACCTT AGCTTTATCG ACAAGCTGGT AGGTGAAGTA
GATAAAGCAC TGCGAGCCTT ATCGCCCGAC ACCAAACCCC ATTCCCGCCC CAGCCCCAAA
GCAGAATGCG GCGAACTAAG CGATGCAGAA AAGCGCTTGT CGGCGTCGTT AATGCGCGTA
AACCACACGG GCGAAGTGTG TGCCCAAGCG CTATACCAAG GCCAGGCCCT AACCGCCAAA
CTGCCTGAAA TACGCCAAGA AATGAACAAC GCCGCAGACG AAGAGCAAGA TCACCTAGCA
TGGTGTGAAG AGCGCGTAAA AGCCCTAGGC AGCCACACCA GCTTTTTAAA CCCCGTTTGG
TATACGCTTT CGTTTTCTAT TGGTGCGGCG GCAGGGTTAA TAAGCGATAA GGTAAGCTTG
GGGTTTGTAG CCGCCACCGA AGATCAAGTG TGCAAGCATC TACAAGAGCA CCTAGCACGC
CTACCACAGC AGGATGCAGC ATCTCGCGTT ATTGTAGAGC AAATGCTTAT TGATGAAGCT
AAGCACGCGC AAACGGCCCT CGCCGCAGGT GGTTACAATT TTCCTAAACC GGTAAAAATG
GGCATGACCG TAATGTCTAA AGTAATGACA GAGACCAGCT TCCACATATA G
|
|---|
| Protein sequence | MTHAAASRNL SFIDKLVGEV DKALRALSPD TKPHSRPSPK AECGELSDAE KRLSASLMRV
NHTGEVCAQA LYQGQALTAK LPEIRQEMNN AADEEQDHLA WCEERVKALG SHTSFLNPVW
YTLSFSIGAA AGLISDKVSL GFVAATEDQV CKHLQEHLAR LPQQDAASRV IVEQMLIDEA
KHAQTALAAG GYNFPKPVKM GMTVMSKVMT ETSFHI
|
|---|
| |