| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0754 |
|---|
| Symbol | |
|---|
| ID | 3966198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 973746 |
|---|
| End bp | 974543 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637919816 |
|---|
| Product | indole-3-glycerol phosphate synthase |
|---|
| Protein accession | YP_526228 |
|---|
| Protein GI | 90020401 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.297551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA CACCCACGGT ATTAAAGAAA ATTATTGCGC GTAAATGGGA AGAAATTGCC
GAGCGCAAAG CGGTGGTGTC TGCCGAGCTG TTGCGCGAAC AAGCGCTGGC TCAGCCTGCT
TGTCGCGGCT TTGTTGCGTC GATTGAATCG CGTTTGAGTA AAGGCGAGTC GGCGGTGATT
GCTGAAATTA AAAAGGCGTC GCCCAGCAAA GGGGTGATTC GCGAAGATTT TAACCCTGCG
GAATTGGCGC GCAGCTACGA GCAGGGCGGT GCGGCCTGTT TGTCGGTTTT AACCGATGTG
GACTTCTTTC AGGGGGCGGA TGCCTACCTG CAGCAAGCGC GTGCAGCGGT TTCTCTACCG
GTTATTCGCA AAGACTTTAT TGTGGATAGC TATCAGCTGC TCGAAGCGCG TGCCATGGGC
GCAGATTGCG TGTTGCTGAT AGTGTCGGCC CTTAGCTTTG AAAAGCTACT AGAGCTAAAT
GAGCAAGCGT TGGCGCTGGG TTTGGATGTT TTGGTGGAAG TGCACGACGC GGTGGAATTA
GAGCAAGCGC TGCAACTACC TAACAAGTTA GTGGGCATTA ACAACCGCAA CCTGCACACC
TTTGATGTTA CCTTGCAAAC TACGTTCGAT TTGTTGCCAG CCATCCCAAG CGATAAGGTA
GTGGTAACAG AAAGCGGTAT ATTTACCGGA GAGGATGTTG CATCTATGCG CGAGCAGGGT
GTGAACACCT TCTTAGTGGG GGAGTCTTTT ATGCGCGCAG ACGAACCTGG TGAAAAGTTG
CGAGAACTGT TCTTTTAA
|
|---|
| Protein sequence | MTDTPTVLKK IIARKWEEIA ERKAVVSAEL LREQALAQPA CRGFVASIES RLSKGESAVI
AEIKKASPSK GVIREDFNPA ELARSYEQGG AACLSVLTDV DFFQGADAYL QQARAAVSLP
VIRKDFIVDS YQLLEARAMG ADCVLLIVSA LSFEKLLELN EQALALGLDV LVEVHDAVEL
EQALQLPNKL VGINNRNLHT FDVTLQTTFD LLPAIPSDKV VVTESGIFTG EDVASMREQG
VNTFLVGESF MRADEPGEKL RELFF
|
|---|
| |