Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0731 |
Symbol | |
ID | 3965291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 944108 |
End bp | 945655 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919793 |
Product | SpoVR family protein |
Protein accession | YP_526205 |
Protein GI | 90020378 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ATACGCCAAT CTCAACAGGG TCAGAATGGA ATTTTGACCT TATAGAAAAG TACGATGCCG CCATTGGCGA AATAGCCAGA GAATACGGCT TAGATACCTA CCCTAACCAA ATTGAGATAA TAAGCTCAGA ACAAATGATG GATGCCTACT CGTCTGTAGG CATGCCCATC GGCTATAGCC ACTGGTCTTA TGGCAAGCAA TTTTTAGGGG TAGAGCAATC TTACCGCCGC GGTCAAATGG GCTTAGCTTA CGAAATTGTT ATTAACTCAA GCCCCTGTAT TGCTTACCTT ATGGAAGAGA ATACCATCAC CATGCAAGCG CTGGTGATCG CCCACGCCTG CTACGGCCAC AACTCGTTTT TTAAGGGTAA CTACTTATTT AAAACATGGA CCGATGCTGA ATCGATTATC GATTACTTGG TATTTGCCAA AAACTATATA GCCAAATGCG AAGAGCGCCA TGGCCTCACC GCCGTAGAAT CTATTTTAGA TTCTTGCCAC GCGCTTATGA ATTACGGCGT AGATAGATAC AAACGCCCAC ACCCTATATC TCATTACGAA GAAGAAGCGC GTCAAAAAGA GCGCGAGGAA TATTTGCAAA AACAAATCAA CGACCTCTGG CGCACGATCC CCGGTGCAGA GCAAACGGCC TCTAAAGCTA AAAAGGCAAC CTTCCCAAGC GAGCCACAAG AGAACTTACT GTACTTTATA GAAAAGAACG CACCACTGTT AGAGCCCTGG CAGCGCGAAG TAGTACGCAT TGTGCGAAAA ATTGCCCAGT ATTTTTACCC ACAACGGCAA ACCCAAGTAA TGAACGAGGG CTGGGCCTGT TTTTGGCATC ACTTCTTATT AAACCAGCTA TACGACCGCG GCAAGGTAAC CGACGGTTTT ATGATGGAAT TTATGCAATC TCACGCGGGG GTAATTTATC AACCACCCTA CAACAGCCAG TATTACAGCG GCATAAACCC TTACACCCTC GGCTTTCACA TGATGACCGA TATACGCCGT ATATGTGAAA ACCCCACCGC CGAAGATAAA GAATGGTTCC CAGATATTGC CGGTAGCGAT TGGAACAAAA CCCTCGATTT TGCCATGCGC AACTTTAAAG ACGAGAGTTT TATTCAGCAA TTTTTATCGC CAAAACTTAT GCGCGACTTA AAGCTATTTT GTATTCTAGA TGACGACACC CAAAAAGAAA TTGAAGTGAA TGCCATTCAC GACGACAGAG GCTATCGCAT TGTGCGCGAT GCACTGGCAG CACAATATAA CTTAGGCAAT CGCGAACCGA ACATACAAGT AGTTAACGTA GATGTGCGCG GCGATAGATC GCTCACTTTG CATCACACCC GTCACAACCG CAAACCACTA AACGAGCCTA GCGCAAAAGA AGTGCTTAAA CATATTCACC AGTTGTGGGG GTTTGATGTG CATTTGCTAT CGGTAGAAGG CGGCGCAACT AAACAGGAGT TCCACTGCCC AGAACCGCCC CCCATAGTGG AGCCAGCGCA ACCAAGCGGC AACTCTATTA TCGTATAA
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Protein sequence | MKKNTPISTG SEWNFDLIEK YDAAIGEIAR EYGLDTYPNQ IEIISSEQMM DAYSSVGMPI GYSHWSYGKQ FLGVEQSYRR GQMGLAYEIV INSSPCIAYL MEENTITMQA LVIAHACYGH NSFFKGNYLF KTWTDAESII DYLVFAKNYI AKCEERHGLT AVESILDSCH ALMNYGVDRY KRPHPISHYE EEARQKEREE YLQKQINDLW RTIPGAEQTA SKAKKATFPS EPQENLLYFI EKNAPLLEPW QREVVRIVRK IAQYFYPQRQ TQVMNEGWAC FWHHFLLNQL YDRGKVTDGF MMEFMQSHAG VIYQPPYNSQ YYSGINPYTL GFHMMTDIRR ICENPTAEDK EWFPDIAGSD WNKTLDFAMR NFKDESFIQQ FLSPKLMRDL KLFCILDDDT QKEIEVNAIH DDRGYRIVRD ALAAQYNLGN REPNIQVVNV DVRGDRSLTL HHTRHNRKPL NEPSAKEVLK HIHQLWGFDV HLLSVEGGAT KQEFHCPEPP PIVEPAQPSG NSIIV
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