| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0727 |
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| Symbol | |
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| ID | 3965287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 939658 |
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| End bp | 940947 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919789 |
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| Product | peptidase M, neutral zinc metallopeptidases, zinc-binding site |
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| Protein accession | YP_526201 |
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| Protein GI | 90020374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTT GCTTTAGAGT GTGCGTTAAT ATTCTTAATA CGTCAACATA CAAAATGCAG
ATATTTTTAG TCGGTGGCGC GGTACGCGAC ACACTATTAC AACTTGAAGT AAAAGAGCGC
GACTGGGTGG TGGTAGGTGC AACCCCAGAG CAACTTATTG CACAAAATTT TGTGCCAGTG
GGTAAAGACT TTCCTGTTTT TTTACACCCT AAAACCAAAG AAGAATACGC CCTTGCCCGC
ACCGAAAGAA AATCGGGTGC TGGCTATACC GGTTTCGAGT GTTACGCAGC ACAGGATGTA
ACCCTCGAAG AAGACCTTAT TCGGCGCGAC CTTACCATTA ACGCCATAGC GCAAGATGAG
CAAGGCAACC TTTACGACCC CTACAACGGC CAAGCCGATT TAAATAATAG GATACTGCGC
CACGTATCCG ACGCGTTTAC CGAAGACCCA GTACGCATTT TACGTATTGC TCGCTTTGCT
GCCCGCTACC ATAAGCTGGG CTTTAGCATT GCCCCCACTA CACTTATGTT AATGAAAAGC
ATGGTTGCCG ATGGCGAAGT CGACCACTTG GTGCCAGAGC GCGTATGGAA AGAAATGAGC
CGTGCGCTAG AAGAAGACAA CCCAGAAATA TTTTTTCAGG TACTTCGCCA CTGCGGCGCA
TTAGCGCGGG TACTCCCCGA GTTAGACCGA CTATTTGGCG TACCGCAACC TCCGCAGCAC
CACCCAGAAA TAGATACCGG CGTACACGCT TTACTTAGCT TGCGCGCTGC TGTGCGGGTG
ACACAATCGC TCCCCGCACG CTTTGCAGCA TTAGTGCACG ACCTAGGCAA AGGCGTAACG
CCCAAAGAAA AATGGCCCAG CCACCACGGC CACGAAACCA CGGGCTTGGC CCCAATAAAA
GCACTGTGCA AACGTTTAGC GGTACCCAAC CCCTGCAGAG ATTTAGCACT GCTTACTGCG
GAGTTTCACA CCCACAGCCA CCGCGCGTTT GAACTGCGCC CCGATACGCT GCTAAAAACC
CTAGAGCGGT TAGATGCACT GCGTAAGCCC GAACGCTTTG AAGAATTTTT AATTGCCTGC
ATGTGCGATA GCCGCGGCCG CACCGACTTA GAAAATGTTG CCTACCCGCA GCGCGAATAC
CTTGCTGGTG CATTTACTTG CATAAGTAAC GTTACCGCCA AAGATGTGCT GGCCCAGCAG
CCAGATTTAC GCGGCCCAGA AATTGGCGAG CAGTTGCGCG CATTAAGAAC CAAAGCATTA
ACCGCATACA AAAAGGCCCA CGCACAATGA
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| Protein sequence | MKSCFRVCVN ILNTSTYKMQ IFLVGGAVRD TLLQLEVKER DWVVVGATPE QLIAQNFVPV
GKDFPVFLHP KTKEEYALAR TERKSGAGYT GFECYAAQDV TLEEDLIRRD LTINAIAQDE
QGNLYDPYNG QADLNNRILR HVSDAFTEDP VRILRIARFA ARYHKLGFSI APTTLMLMKS
MVADGEVDHL VPERVWKEMS RALEEDNPEI FFQVLRHCGA LARVLPELDR LFGVPQPPQH
HPEIDTGVHA LLSLRAAVRV TQSLPARFAA LVHDLGKGVT PKEKWPSHHG HETTGLAPIK
ALCKRLAVPN PCRDLALLTA EFHTHSHRAF ELRPDTLLKT LERLDALRKP ERFEEFLIAC
MCDSRGRTDL ENVAYPQREY LAGAFTCISN VTAKDVLAQQ PDLRGPEIGE QLRALRTKAL
TAYKKAHAQ
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