Gene Sde_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0692 
Symbol 
ID3964943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp894577 
End bp895776 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content43% 
IMG OID637919753 
Producthypothetical protein 
Protein accessionYP_526166 
Protein GI90020339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000507336 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGTAGTT TTTTCTTCTT CTTCTTTTGG TTCTTGTGGA TTGGCGGGGC CAACGTAATA 
CCCCAAACCT ATTTTCTTGC CGTTGCTCCA GAATACAAAG AGCAACTGGT CACTCTGTTG
CTTATGCTGG GGTCACTTGC ATCAATAGCA GGTATTGTTT GGGAAACAAA ATTAGGCAAA
TATATTTCTT TGCAAGCAGC CCTATATGTA GGGTTGCCCC TTGTGGTTAT TAGCTTTGGC
TTGTTGTTTT CAGGCTTGTC TGTTGTGCCC TATTTTGGCT TTTATTTATG CTTTCGGTTT
TTATCGTGTG CGTTGTATCA GAAATTAGAT GCGGGGATAT GTCATCACGC AGACATACAG
GTTAGCGATA ACCATGCAAA GCACAGCATG ATATTTATGT TGGTGGCGGT GTGTTTGGCT
CCTGTGTTTT TTGCCTTCTA CCAACATGGC GTTGTTGTTA GTGGGGTAGT CATTTTACTC
GCCTTCGCAG CGGCGTTTTA TTATCGCAAT ATAGCTAGTG TAATAGGTGC AGGTGTAGTA
GGCGCCGGTA TAACCGCTAC AAGCGATAAC GGCGCAAAAG AAAATACCAA AAACATACCT
CTTCATCTAA GTGATAAGTA TTTTCTCATT TACAGTGGTG CTTATTTGGC GGTGGTTTTT
TTAACAAGCT CTCTACTTGT TTATTTTATT CGCGATTTTT ACGGGTTTAA AAGCCCTGTA
AAGCTCGGTG GCTTGGTGAT GCTAGTGATT AGTTTGGCAG CGGTTGTTAG CTGTTTGCTA
TATGGTCGCT TTAGGCAATC GCCATTTCGC GATAGTGGCT GTGTGTGGGT GCAAGTAATA
ATTTTAGCAG CAATGAGTGT AGGTGTTGTA TTGCTGTACC TCAAATTGGT GCCCTCGTTT
ATGTATGTGG CCGCAAGCGC GTCTTTGATG GGTATTTCGT ATGGGGTGTT TGTAGTATTT
ACGCGCAGCC TAGTTGTGCA TCGCGCTAGA GATTGCGGCA GAACTACGCT ATTGGCCTGG
TATAACATGC TGCCATTTAT TAGCTCTATT GCTATATTCG CTGCGGCGGG TGGCTTAAAG
CTTATTATCG CGAGCAGTGC GTATAGCTAT TATTGGTGCA TTGCCGCAGT ACTAGCTGTA
GTAGGTGTGA TTGCGCTAAT TGCATTAATT GCTTTTAATC GCAATATTGA GAAGTACTAG
 
Protein sequence
MRSFFFFFFW FLWIGGANVI PQTYFLAVAP EYKEQLVTLL LMLGSLASIA GIVWETKLGK 
YISLQAALYV GLPLVVISFG LLFSGLSVVP YFGFYLCFRF LSCALYQKLD AGICHHADIQ
VSDNHAKHSM IFMLVAVCLA PVFFAFYQHG VVVSGVVILL AFAAAFYYRN IASVIGAGVV
GAGITATSDN GAKENTKNIP LHLSDKYFLI YSGAYLAVVF LTSSLLVYFI RDFYGFKSPV
KLGGLVMLVI SLAAVVSCLL YGRFRQSPFR DSGCVWVQVI ILAAMSVGVV LLYLKLVPSF
MYVAASASLM GISYGVFVVF TRSLVVHRAR DCGRTTLLAW YNMLPFISSI AIFAAAGGLK
LIIASSAYSY YWCIAAVLAV VGVIALIALI AFNRNIEKY