| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0666 |
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| Symbol | |
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| ID | 3967640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 846867 |
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| End bp | 847589 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919727 |
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| Product | peptidase S41 |
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| Protein accession | YP_526140 |
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| Protein GI | 90020313 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.438312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000531338 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGCTTT TCTCAAATTC ACGCAATTGG ATTGCCGCTG CAAGCTTGCT AATCGGCGGC
GTTGTGCATG CAGACACTAT TAGTTACACA GATCTAGTGG CCGGCAGCCA TTCGAACACT
GTTAATGGGA CCACGGTTTC CGCTTGGAAC AACACCGCTC AAACAGAAGT AGCTTACTTC
GGCGGTCGCA CTCAGGCTGG CGTTGCAGGC ATGGGTATTC GCGGCCACGG CAATAACGAA
ATCGACTTCT ACTACAACAG CAATGGCCAA GGCGATTCAG AAACCATGGC TTTCGATTTC
GCTAACAATG TTGTTATTGG AGAACTTAGC CTCAGCTTGT TGTTTAACGG CCCTGAGTAC
AGCAACGAAC ATGAAATTGC TGAAATTTTT ATTGATGGTC ACGTTGGTCG CTTAGAGCTA
GACCCAACCA AAGAAGATTC TGCCAAATGG TATTTAGATG GCAGCTTGGT TGGCGAAGTA
ACATCTTGCT CTCCAGGTGC TACTGCACAA GGTGGTTCCG GCTGCTTCAC TATTCTTAAC
CCATTTGGCA ACTTAGCAAC TGCTAACCTC GATTTAACCG CTGCTATGAT TCCAAATATC
GACGAATCCG ACTACCTGTT CCGTCACGTT GTATTCGCTA GCGTACCAGA GCCAGGCACT
TTGGCACTGT TCATGATTGG CGCAGCTGGT CTTGTTATAT CGCGTAGAAA AACACGCGCT
TAG
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| Protein sequence | MSLFSNSRNW IAAASLLIGG VVHADTISYT DLVAGSHSNT VNGTTVSAWN NTAQTEVAYF
GGRTQAGVAG MGIRGHGNNE IDFYYNSNGQ GDSETMAFDF ANNVVIGELS LSLLFNGPEY
SNEHEIAEIF IDGHVGRLEL DPTKEDSAKW YLDGSLVGEV TSCSPGATAQ GGSGCFTILN
PFGNLATANL DLTAAMIPNI DESDYLFRHV VFASVPEPGT LALFMIGAAG LVISRRKTRA
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