Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0659 |
Symbol | |
ID | 3967633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 836334 |
End bp | 837053 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919720 |
Product | SapC protein, putative |
Protein accession | YP_526133 |
Protein GI | 90020306 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0131187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.604941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTACAC AACTGTTGTT TTATAAAGAG CCTACCGTAC TAGAAAAAGA CAAGCACGCA GACCTTACCT TCAAGCGCGA AGGTAGCTAC TCATTTGCTT CTGCTATGAA CTCTGCCCCT TTGGCGGGTG TTGAATTCAC CCAAGCTTGT CACGATCACC CCATTTTGTT TGTTAAAAAC GAAAAGTCTG GTTTTATCCC TGTTGTATTG CTGTCACTAA AGAAAGACAG CCACGATCTA GGTGATGACT GGGGCGGCAA ATACGTCCCC GCTTTTATCC GCCGTTACCC TTTTGGTGTA ACACCAGAAG GCGCAATTGT ATTCGATAAA GAAGCGCCAC ACTTCTCTGG CGGCGGCGAC GCTATTTTCG ACGAAAACAA AGAACCTACC GAAACATTGA AGCAAATTGT TGGCTTTTTG CGCTCAGTAG ACACAGGCTA CGCAGAGACT GAAGAGTTTT GTCGTGCCCT TGCTGAAAAA GAAATTCTGC AACCGCTAAA CCGCGCACTT AAATTTGGAG AACAGCAAGT AAACCTTACC GACCTTTACC GTGTAGACGA AGCAAAGCTG TACGAATTGG ACGAAAAAGA ATTGCACACA TGGTTTAAAA ACAAGTGGAT TGCTTGGTGT CATTCACACC TTCACTCTTT GGCAGAGCTA AACGGTGTTG CTAAGCGCCA TATGGATGCC CTAGAAGCAC AAGCGCCAAA AGCTGAATAA
|
Protein sequence | MSTQLLFYKE PTVLEKDKHA DLTFKREGSY SFASAMNSAP LAGVEFTQAC HDHPILFVKN EKSGFIPVVL LSLKKDSHDL GDDWGGKYVP AFIRRYPFGV TPEGAIVFDK EAPHFSGGGD AIFDENKEPT ETLKQIVGFL RSVDTGYAET EEFCRALAEK EILQPLNRAL KFGEQQVNLT DLYRVDEAKL YELDEKELHT WFKNKWIAWC HSHLHSLAEL NGVAKRHMDA LEAQAPKAE
|
| |