Gene Sde_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0658 
Symbol 
ID3967632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp835266 
End bp836042 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content49% 
IMG OID637919719 
Productferredoxin--NADP(+) reductase 
Protein accessionYP_526132 
Protein GI90020305 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0112179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.808324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TATTAACCGA AAGAGTTCTC GATGTTCGTC ACTGGAATGA CAATTTGTTT 
AGTTTTACCA CTACGCGCAG CCCTAGCTTC CGCTTTCGCA ATGGCCACTT CACTATGATG
GGGTTGGCGC AGGATAGCGG TCGGCCGCTG TTGCGCGCCT ACTCAATTAC TAGCGCTAAC
TATGAAGATA CATTGGAGTT CTTCTCCATT AAAGTGCCCG ATGGCCCGTT AACCTCGCAG
TTACAGCATA TCCAACCCGG TGATGAGGTA CTGGTTAACA GCAAGTCCAC GGGTACACTG
GTGGCAGACA ACCTATTGCC GGGTAAGAAC CTGTACTTAA TAAGCACGGG TACGGGCTTG
GCGCCGTTTA TCAGTATTAT TAAAGACCCA GAAATATACG AGCAATTTGA TCGCATAGTG
CTAACCCACG GTGTGCGCTA CAAAAGTGAG CTGGCTTATC AAACCCTGAT TAATGAGGAA
TTGCCGCAAA ACGAATTTTT TGGCGATTTG GTAAAAGAAA AATTAGTGTA TTACCCAACT
GTTACCCGTG AGGCCTACAT CAATAATGGG CGATTAACCG ACCTGCTCGC ATCTGGCCGT
TTGGCGCGCG ATGTTGGCTT GCCGCCTATC AACCCAGAAG ACGATAGGTT TATGCTGTGC
GGCAGCCCAA GCATGCTGAA GGACTTTTGC GGCATCTTGG ATGTAAATGG CTTTAAGGAG
GCGCGTGGTG GTAAACCCGG CAGTTATGTT ATTGAGCGCG CCTTTGTAGA AAGCTAA
 
Protein sequence
MSTLLTERVL DVRHWNDNLF SFTTTRSPSF RFRNGHFTMM GLAQDSGRPL LRAYSITSAN 
YEDTLEFFSI KVPDGPLTSQ LQHIQPGDEV LVNSKSTGTL VADNLLPGKN LYLISTGTGL
APFISIIKDP EIYEQFDRIV LTHGVRYKSE LAYQTLINEE LPQNEFFGDL VKEKLVYYPT
VTREAYINNG RLTDLLASGR LARDVGLPPI NPEDDRFMLC GSPSMLKDFC GILDVNGFKE
ARGGKPGSYV IERAFVES