| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0657 |
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| Symbol | |
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| ID | 3967631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 834206 |
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| End bp | 835099 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919718 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_526131 |
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| Protein GI | 90020304 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0325779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.831688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACA CCCTGCGACA ACTTGAAGTA TTTTTAGCTG TTTCCCACTA CGAAAATGTT
TCTAAGGCCG CCGATGAGCT CGCCATGTCG CAATCGGCCT GCAGCAGCGC CCTTAAAGAC
TTTGAATCAC AATTTGATAT TCAACTGTTC GACCGAGTAG GTAAGCGCTT GCAAACCAAC
GAGGAGGGGC GCCGACTGCG CCCCAAGGCC GAAGCTCTAG TAGCCCAAGC CAAAGACCTA
GAGCGCGACC TAATCCAGCA CAACCAGGTA GGCAAGCTGA ACATAGGCGC CACGCTCACC
ATTGGTAACT ACCTGTGTGT AAAACTTATT GATGAATTTA TAAAAACCCA CCCCGGTGCC
AAAGTGCGCC TTGAGGTAGC GAATACACGC CGTATAGCCG AGGAAATTCT CAATTTTGAT
ATAGACCTAG GTATGATAGA AGGCGAATTT CAGCACGATG AGCTCGATGT AATTCCGTGG
ATGGAAGACG AACTTGTGTG TTTTTGTTCA CCTAAACACC GCTTGGCGAG TGTAGGCCAT
ATAAGTAAAG ACGACTTTTT AAAAGAGAAA TGGATACTGC GCGAAGCCGG CTCGGGCACC
CGCCAAACCT TTGATCGAGC CGTAAGTGGT TTGCTGTCTC AATTAGACAT TACCCTAGAA
TTGCAGCACA CCGAAGCCAT TAAACGGGCG GTAGAAGCAG ACATTGGCAT TTCGTGTTTA
TCTATCATAT CGCTAAAAGA TGCATTTGCT CGCGGCGCAC TGGTGCCACT TACCTGCGAC
CTCGATTTAA AACGCCACTT TTATTTAGTG ATCCATCAAC AAAAATTTCG CAGCACCGGC
ATTCAACGCT GGCTAGAACT ATGCGAAAAA CACAACCACA TAAACGCCCA TTAA
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| Protein sequence | MKYTLRQLEV FLAVSHYENV SKAADELAMS QSACSSALKD FESQFDIQLF DRVGKRLQTN
EEGRRLRPKA EALVAQAKDL ERDLIQHNQV GKLNIGATLT IGNYLCVKLI DEFIKTHPGA
KVRLEVANTR RIAEEILNFD IDLGMIEGEF QHDELDVIPW MEDELVCFCS PKHRLASVGH
ISKDDFLKEK WILREAGSGT RQTFDRAVSG LLSQLDITLE LQHTEAIKRA VEADIGISCL
SIISLKDAFA RGALVPLTCD LDLKRHFYLV IHQQKFRSTG IQRWLELCEK HNHINAH
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