| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0653 |
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| Symbol | |
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| ID | 3964982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 827992 |
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| End bp | 829083 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919714 |
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| Product | regulatory protein, LacI |
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| Protein accession | YP_526127 |
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| Protein GI | 90020300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.773413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAG CGCGGTTTAT AAAGGTTGCA TTTTGGCTGG TGTATAGTTG TTTTGTATGC
GGTATAAGCG CTGGTACGCA TGCGCTGGTT GTATTGCAAT ATCATCACGT ATCCGATAAA
ACCCCCGCAG CCACATCAAT AAGCCCCAAA GTTTTTGAAG AGCATCTCGA TTATTTAGCA
GAGAATAAAT TCAATGTTAT CTCAATAGAG GAGCTGCCAG ACTTGTTGGA ATCGGGCAAT
GCCTTACCTG ATAGAAGTGT GATTATTACA TTTGATGATG GTTACGAATC TATCTACACC
ACCGCTTACC CGCTACTTAA AAAGCGCAAA TGGCCGTTTA CGGTTTTTAT AAATACCAAG
CCCCACGACG AGAAAAACCC GCAATATATT CAGTGGGATG AACTGCGTGA AATGGCGAAG
CATAAAGCGA CCATTGCCAA CCACTCCGAT AGCCACCCGC ATTTAATTCG CAAAGAGTTG
GGGTTGTCTG TTAAAGAGTG GCGCGAATGG CGCATCGCGC AAATAGAATT TGCGCAAAAG
CGAATTAAAA AAGAAATAGG TAAAGCGCCG CCTTTTTTTG CTTATCCATT CGGCGAATAC
GATGCCGAGC TTGAGCGCGA GTTGAAAAAA AGTGGCTACC TAGCTTTTGG TCAGCAGTCT
GGGCCGGTTG CGAAAAATTC CAACCCGCAA AGCTTACCGC GCTTCCCTTT TGGCGGTGTT
TACGGCGGGA TGGATGACTT TATTACTAAA GTGTGGAGCT TGCCCTTGCC GGTGACCTCG
GTAAAAGTAC TCACAGAAAA AGGCGTACTT ATCGATAACC CAGAATTACC CATGGGGGTG
GATATTCCCG AGCTGGAATT GGTTTCGCCA ATCGCGGCGT ATATTCGAGG TATACAGTGT
TTTGCGTCTG GCCAAGGGGC AATTGAAACC CAAGTGCAAA CTAGCACCAT ACGCGTAAAA
GCTAAGCGGC CTTTGCCGGT GGGGCGCAGC CGCTACAATT GTACCGCCCC AGCGGGCGGT
GGCAGGTTTT ATTGGTACTC AAGCTTATTT ATTAAGCGCA AGCCTGATGG CACCTGGTAC
CAAGAGCACT AA
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| Protein sequence | MFLARFIKVA FWLVYSCFVC GISAGTHALV VLQYHHVSDK TPAATSISPK VFEEHLDYLA
ENKFNVISIE ELPDLLESGN ALPDRSVIIT FDDGYESIYT TAYPLLKKRK WPFTVFINTK
PHDEKNPQYI QWDELREMAK HKATIANHSD SHPHLIRKEL GLSVKEWREW RIAQIEFAQK
RIKKEIGKAP PFFAYPFGEY DAELERELKK SGYLAFGQQS GPVAKNSNPQ SLPRFPFGGV
YGGMDDFITK VWSLPLPVTS VKVLTEKGVL IDNPELPMGV DIPELELVSP IAAYIRGIQC
FASGQGAIET QVQTSTIRVK AKRPLPVGRS RYNCTAPAGG GRFYWYSSLF IKRKPDGTWY
QEH
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