Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0582 |
Symbol | |
ID | 3964989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 720722 |
End bp | 722113 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637919645 |
Product | hypothetical protein |
Protein accession | YP_526058 |
Protein GI | 90020231 |
COG category | [S] Function unknown |
COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000319564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0200907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGC CCAGTAAAAT ACACTCACTC GCTATGGTGT TCTGCTTAAC AATTGCCGCG TGGAGCCAAA CAGCACTCAG CGCTGACTGG CTATATACCG TGCGCCCAGG CGACACCTTT TGGGACCTGT GCCTTAAATA CACAAACAAA AGCAACTGCT GGCAGGAGCT GCCCGACCTG AACCAGGTAA AACGTACCCG CGAACTGCCG CCAGGCTACG TTATCCGCAT CCCCGTCAGC TGGTTGAAAC AAGCGCCAGC ACCGGTGACT ATCGAACACC TTTCTGGCGA TGTATTCTTG GCCGCGCAAG CAACCGCGCC TCACACACCC GCCATAAACA GCGCTGCCAA CACGCCAAAA GCTAAACCAC TTAGCAGTGG CGAAAAACTG AGCATTGGCA GCACCGTGTA TACCGAAAAC GGCTATGCCA GCCTGCGCTT CGCCGACGGC AGCACCCTTA TGGTTATGCC CTACTCATCG GTAGCGCTAG ATGCCTTTAC CACCCACGAT GGCGAAGCCA TTGTAGATAG CCGTATGCGC CTGCTAAAAG GCACGGTAAA AGCCAAGGTT AAGAAGCGCC AGCCGCAAAC CCGCTTTAGT ATTACCACGC CCGATGCAGT TGCAGCCGTA CGCGGCACCG AGTTCCAAGT AAGTTCGAGC GACGACCAAG CAGCCCCCAC GCGTATAGAA GTATTTGAAG GCCTGGTTGG CGTTGGTAAC GACAAATCAC AGCAAGAAGT ACCCGCAGGC TTTGGTATTA GTGCAAGTAA AGATAAAGCG CTTGCGGCCC CCAAAGCGCT GCTAACCGCC CCTGTAATCA CGCCCCCTCC GGCTGCGGTT ATTCAACCTT ATACGCTTGA ATGGCAAGCT TTAGAGCAAG CCAGCAACTA TGAGGTTCAT ATAAATAGCC ACGACGAAAC CAATGCACTA CAACAGCACG CAACGGTTGC CACAACAGCA ATGGAAATAA ACAACCTCGC CATAGGCTGC TACACCGTAA ATGTAAGCGG TGTAGATGCC GAGCAGTTTC AAGGCTTAGC CGCACAGCAA AAACTTTGCA CCGCGCCGAA TGTTGGCACC CCCGTGCTGG CTAAAACCGG CTTGCAAAAG GCAAAGGGCA ACAACAACCT AACTTGGGCC GCTCCCGAAG GCGCCCAAAG CTACGAGGTG CAATTTGCTA GCGATGCCGA GTTCAGCCAC ATAACCAATG AAACAACAAC TAACACACCC ACAATAGCGC TAACCACCAA CAAAAAAGTC TTTATTCGCG TGCGCGCGAT TGGCGAGGCA GGCCAAGCCA GCAGCTATTC AAATGCTTTG CCTTACCAGC CCAAAAACAA AGACTGGCAA GCCATTTTAT TTATAGGAAT CGCGTTCATT GCTGGGCTTT AA
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Protein sequence | MTKPSKIHSL AMVFCLTIAA WSQTALSADW LYTVRPGDTF WDLCLKYTNK SNCWQELPDL NQVKRTRELP PGYVIRIPVS WLKQAPAPVT IEHLSGDVFL AAQATAPHTP AINSAANTPK AKPLSSGEKL SIGSTVYTEN GYASLRFADG STLMVMPYSS VALDAFTTHD GEAIVDSRMR LLKGTVKAKV KKRQPQTRFS ITTPDAVAAV RGTEFQVSSS DDQAAPTRIE VFEGLVGVGN DKSQQEVPAG FGISASKDKA LAAPKALLTA PVITPPPAAV IQPYTLEWQA LEQASNYEVH INSHDETNAL QQHATVATTA MEINNLAIGC YTVNVSGVDA EQFQGLAAQQ KLCTAPNVGT PVLAKTGLQK AKGNNNLTWA APEGAQSYEV QFASDAEFSH ITNETTTNTP TIALTTNKKV FIRVRAIGEA GQASSYSNAL PYQPKNKDWQ AILFIGIAFI AGL
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