| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0550 |
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| Symbol | |
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| ID | 3967893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 671253 |
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| End bp | 671942 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919613 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_526026 |
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| Protein GI | 90020199 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000958325 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTAA TTTTATTAGC CGAAGACGAT CGCCGTTTAG CAAACCTAGT AAAAGATTAC
CTCGGCAATC ACGGTTTTGA TGTGGTTATT GAAGAAGCCG GCCACAATGT GGCGCGCAGC
GTACAAACCT TAGAGCCGGC GTTGGTAATA TTAGATATCA ATTTGCCAGG TAAAGATGGG
CTAAGCGTAT GCAAAGATAT TCGACCAAAA TTTAATGGCC CCATTCTTAT GCTTACCGCG
CGCGACACCG ATGCCGACCA AATTCTAGGC TTGGAATACG GCGCCGACGA TTACGTAATA
AAACCCGCAG AGCCGCCTGT GTTGCTTGCT CGCATTCGCG CCTTGTTACG CCGCTACAAT
CAAGAAATTA GCAAACCGCA GGATGAATAC ACCTTTGGTG AGCTCACCAT TCATATGGCC
GCGCGCCAAG TCTTTATTGG CGGCGAAGAA ATAAAGCTCT CTAGCCACGA ATTTGAATTG
CTTTGCACTT TTGCGGCGCA GCCGGGCAAA GTGTTAAGTC GTGAATATCT ATTTAATATT
ATTTACAGTC GCCCCTACGA CGGTATGGAT AGAACCATTG ATGTGCGCAT ATCGCAATTG
CGAAAAAAAG TGGGCGATGC ATCCGACAAC CCAACCAAAA TTAAAACCGT ATGGGGGCGC
GGCTACTTAT TTGTTGCCGA TGCGTGGTAG
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| Protein sequence | MSLILLAEDD RRLANLVKDY LGNHGFDVVI EEAGHNVARS VQTLEPALVI LDINLPGKDG
LSVCKDIRPK FNGPILMLTA RDTDADQILG LEYGADDYVI KPAEPPVLLA RIRALLRRYN
QEISKPQDEY TFGELTIHMA ARQVFIGGEE IKLSSHEFEL LCTFAAQPGK VLSREYLFNI
IYSRPYDGMD RTIDVRISQL RKKVGDASDN PTKIKTVWGR GYLFVADAW
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