| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0522 |
|---|
| Symbol | |
|---|
| ID | 3968763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 645231 |
|---|
| End bp | 645593 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637919585 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_525998 |
|---|
| Protein GI | 90020171 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTA GCAAAATTCT TGTAGTCGAT GATTCACCGG TAGAATTGCA ACACCTTAAA
GGAATAGTCG AAGAAGCGGG CTATCAAGTG GTAACAGCGA GCAACGGTAA AGAGGCGCTA
GAAAAGGCTA AATCTTTCCA CCCCGATGTG ATTTTAATGG ACGTCGTTAT GGACGGTGTA
GACGGCTTCG AAGCCTGTCG CAATATTACT AGCGATCAAT CTACCGCCAA CATTCCCGTG
TTTTTCGTAA CCAGTAAAAA TCAAAAAGCC GACCGCGTAT GGGGCGAACT ACAAGGCGGC
AAGGGCATGA TCACCAAGCC CTATACTTCA GACCAAATTT TACAAGCAAT TAACGAAGCG
TAA
|
|---|
| Protein sequence | MAASKILVVD DSPVELQHLK GIVEEAGYQV VTASNGKEAL EKAKSFHPDV ILMDVVMDGV
DGFEACRNIT SDQSTANIPV FFVTSKNQKA DRVWGELQGG KGMITKPYTS DQILQAINEA
|
|---|
| |