| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0489 |
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| Symbol | |
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| ID | 3966047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 600760 |
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| End bp | 601491 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919552 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_525965 |
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| Protein GI | 90020138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGTTA TTCCAGCCAT TGATTTAAAA GACGGTGCCT GTGTGCGCTT GCGCCAAGGT
TTAATGGAAG ATTCCACCGT GTTTTCTGAC GACCCCGCTG CGATGGCTCG CAAATGGGTT
GAGCAGGGCG CAAAGCGTTT GCACCTAGTG GATTTAAACG GCGCCTTCGC CGGCGAACCA
GTTAACGGTG AGGTGGTTAA GGCCATCGCT AAAGCGTACC CAAACCTACC TATCCAAATT
GGTGGCGGTA TTCGCAGCTT AGAAACGATT AAGCACTATT TAGATGCCGG CGTAACCTAC
GTAATTATTG GTACCAAAGC GGTAAAAGAG CCCGAGTTTG TTAAGCAGGC GTGCGATGCG
TTTCCTGGCC ATATTATTGT TGGTTTAGAT GCTAAAGACG GCTACGTAGC CACCGATGGT
TGGGCGGAAG TGTCTACCGT AAAAGCTACC GACCTCGCCA AACAGTTTGC CGCAGATGGT
GTATCTGAAA TTGTTTACAC CGATATCGCC CGCGACGGCA TGATGCAAGG CGTTAATATT
GAAGCCACCG TCGAAATGGC GCGCGCAGGC AATATACCTA TTATTGCATC GGGCGGCATA
ACCAATATGG ACGATATTAA AGGCCTTATG GCGGTTGCAC ACGAGGGCAT TACCGGCGCT
ATTACCGGCC GCGCTATTTA CGAAGGCAGT TTAGATTTGG CCGAAGCGCA AGCCTACTGC
GACGCGCAAT AA
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| Protein sequence | MIVIPAIDLK DGACVRLRQG LMEDSTVFSD DPAAMARKWV EQGAKRLHLV DLNGAFAGEP
VNGEVVKAIA KAYPNLPIQI GGGIRSLETI KHYLDAGVTY VIIGTKAVKE PEFVKQACDA
FPGHIIVGLD AKDGYVATDG WAEVSTVKAT DLAKQFAADG VSEIVYTDIA RDGMMQGVNI
EATVEMARAG NIPIIASGGI TNMDDIKGLM AVAHEGITGA ITGRAIYEGS LDLAEAQAYC
DAQ
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