Gene Sde_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0484 
Symbol 
ID3966042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp596464 
End bp597186 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID637919547 
Productputative methyltransferase 
Protein accessionYP_525960 
Protein GI90020133 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA TTGATTTTAA CCGCATACAA GTAAAACCAG GCGATACACT ACTGGACTTA 
GGCTGCGGCG AAGGCCGCCA CACCATTGGT GCCTATTTAA GTTTCCCCGG CGCACTTATA
GTAGGGGTAG ATTTAAGCCT TAAAGATTTA ACCACCGCCA ATCAGCGCCT GCAGGAATGG
CAGACAGACG ACGTATTAGC ACAGGGCGCG CAGGCACAAT TTATTTGCGG CGACGGTTTT
AACCTACCCT TTGCCGACCA CAGTTTTGAC CATATTATTT GCTCGGAAGT ATTAGAGCAC
ATACCCAACT ACCAACGCTT TTTTGCAGAG CTACACCGCT TGCTAAAGCC CGGCGGCAAC
CTGTGTTTGA GTGTGCCGCG CGCCTGGCCA GAAAGAATTT GCTGGAAGCT AAGCGACGCC
TATCACGAAG TAGAAGGTGG CCACGTACAT ATATTTAAAC CCGCCGACAT TCACAATTTG
GTCACACAAT TCCCCTACTG TGCGCGCGGG CAGCACGGTG CGCACGCCTT GCACGCACCC
TACTGGTGGC TGCGCTGCCT ATTTTGGCGC GAGGGCGAGC AGCTTTGGCC GGTGCGCCTC
TACCATAAAT TTTTAGTGTG GGATTTAATG CAACGCCCCT GGTTAACCCG CACCCTAGAC
AAACTGCTTA ACCCAGTAAT GGGCAAAAGC GTGGTGTTTT ACTATGAAAA ACAACAATCA
TAA
 
Protein sequence
MLTIDFNRIQ VKPGDTLLDL GCGEGRHTIG AYLSFPGALI VGVDLSLKDL TTANQRLQEW 
QTDDVLAQGA QAQFICGDGF NLPFADHSFD HIICSEVLEH IPNYQRFFAE LHRLLKPGGN
LCLSVPRAWP ERICWKLSDA YHEVEGGHVH IFKPADIHNL VTQFPYCARG QHGAHALHAP
YWWLRCLFWR EGEQLWPVRL YHKFLVWDLM QRPWLTRTLD KLLNPVMGKS VVFYYEKQQS