| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0403 |
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| Symbol | |
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| ID | 3965979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 499317 |
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| End bp | 500303 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919466 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport system protein |
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| Protein accession | YP_525879 |
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| Protein GI | 90020052 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTTA ACGCAATGCC AAAACGACTC CTAAGCATGA AAGCTGTTGC AGCTGCCCTG
CTTGTTTTAG TGTTGGGTGC GTGTTCCCGC AATGAGATGC AGCAGCTTTC CATTGCCATA
AACCCCTGGC CCGGTTACGA GTTGCTGTAT TTGGCGCAAG AGCAGGGTTT TTTTCACGAG
CTGGGGTTGG ATGTGCGCTT AGTGGAGCTT AACTCGCTTA GTGATGCGCA GCGCGCTTAT
ATGTCGGGGC AGGTTGACGG CTTAACATCC ACCTTGGTGG AAGCCGTACT TATTCAAGTT
GATTCCGCTT ACCCGTTGCA GGTGGTTATT CCCACCGACT ACAGCAACGG CGGCGATGTT
ATTTTGGCGC AGGCCGGCAT CACAAGTTTA ACCGAGCTAA AAGGTAAGCG GGTGGGCTGC
GAAGCCAACA GTTTGGGTAT ACACGTTTTA TACCACGCGC TTCGGCGGGT TGGTTTATCC
CTGAGCGACG TAGAGGTGGT AAATGTGGGG CAGTCACAGG GGAGCGAAGA GCTGGCACTG
GGTGTGCTAG ATGCACTTGT TACCTACCCG CCAACGTCTA TAGAGGCCCT AAAGGCGGAA
GGTGTGCATA AGCTATTCAC TTCGCGTGAA GCGCCAGAAG AGATACTCGA TGTGCTATCT
ATCAAACAGT CGGTGCTTGA GCGCTACCCG GCGCTACCTC AGCAGTTGTT AGCCGTTTGG
CAACGCGCTT ACGAATATAC AGAGCAACAC CCCAAACAGG CATTTGCCAT TATGGCGGAG
CGAGAACAAG TTTCAGTAGA AGAATTTGAA ACAATGTTCA ACAACGAAAT ACATGTATTT
GATAAAGATG GCGCACTACA AATATTGCGC GATTGGTCGT CGCTAACCAA CAAATTAATG
GAAACCTGCG AAGTGTTAAA AGAAATTAAT CAACATAACA GCAATTGCTC GCGCGTGCAT
ACGATGGTGA ATCGTGAGAT GTTTTAA
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| Protein sequence | MMFNAMPKRL LSMKAVAAAL LVLVLGACSR NEMQQLSIAI NPWPGYELLY LAQEQGFFHE
LGLDVRLVEL NSLSDAQRAY MSGQVDGLTS TLVEAVLIQV DSAYPLQVVI PTDYSNGGDV
ILAQAGITSL TELKGKRVGC EANSLGIHVL YHALRRVGLS LSDVEVVNVG QSQGSEELAL
GVLDALVTYP PTSIEALKAE GVHKLFTSRE APEEILDVLS IKQSVLERYP ALPQQLLAVW
QRAYEYTEQH PKQAFAIMAE REQVSVEEFE TMFNNEIHVF DKDGALQILR DWSSLTNKLM
ETCEVLKEIN QHNSNCSRVH TMVNREMF
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