| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0388 |
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| Symbol | |
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| ID | 3967596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 479069 |
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| End bp | 479998 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919451 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_525864 |
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| Protein GI | 90020037 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCG CAGATCGCGA TGGAGTTATT TGGTTTGACG GTGAATTAGT ACCTTGGCGC
GATGCTAAAG TGCATGTACT TACCCACACA TTGCATTACG GCATGGGCGT ATTCGAAGGC
GTACGCGCAT ACGAAACGCA AAATGACGGC ACCTGCATTT TTAAACTACA AGAGCACACC
AATCGCCTAT TCCGCTCCGC GCATATTATG AATATGCCCG TAAGCTGGAC CAAAGAGCAA
TTAAACGAAG CCCACAAGCT TGTTGTGCGC GAAAACAACC TTCACGAAGC TTACTTGCGC
CCAATGATTT TTTACGGATC TGAAGGGATG GGTTTGCGTG CCGACAACTT AAAAACACAC
GTTATTGTTG CCGCGTGGAA CTGGCCATCG TACATGTCGC CAGAAGCCAA AGAAGTAGGC
ATTAAAGTGC GCACCTCAAG CTACACCCGC CACCATGTAA ACATCTCCAT GTGTAAAGCC
AAAGCCAATG GTCACTACAT CAACTCTATG CTTGCCCTAA AAGAAGCATT AGATTGCGGT
TGTGAAGAAG CTTTGCTACT CGATACAGAA GGCTACGTAG CGGAAGGCAG CGGCGAGAAT
ATTTTTATCG TGCGCGACGG CGTAATCTAC ACGCCAGAGC TAACCAGCTG CTTAGATGGT
ATTACCCGTG CCACCATCTT TCAACTAGCA GCCGATTGCG GCTACACCAT TAAAGAAAAA
CGCATCACCC GCGACGAAGT GTACGTAGCC GATGAAGCCT TCTTTACCGG TACCGCCGCA
GAAGTATTAC CTATTCGCAT GCTAGATGGC CGCAACATTG GCGAAGGCAA GCGCGGCCCT
ATTACCGAGC GTTTACAATC TTTGTATTTC GATGCGGTAA AAGGTCGACT AGACAACCAC
CACGATTGGC TTGCGCCCAT CGCGAAGTAA
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| Protein sequence | MSFADRDGVI WFDGELVPWR DAKVHVLTHT LHYGMGVFEG VRAYETQNDG TCIFKLQEHT
NRLFRSAHIM NMPVSWTKEQ LNEAHKLVVR ENNLHEAYLR PMIFYGSEGM GLRADNLKTH
VIVAAWNWPS YMSPEAKEVG IKVRTSSYTR HHVNISMCKA KANGHYINSM LALKEALDCG
CEEALLLDTE GYVAEGSGEN IFIVRDGVIY TPELTSCLDG ITRATIFQLA ADCGYTIKEK
RITRDEVYVA DEAFFTGTAA EVLPIRMLDG RNIGEGKRGP ITERLQSLYF DAVKGRLDNH
HDWLAPIAK
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