Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0379 |
Symbol | |
ID | 3967626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 467619 |
End bp | 468173 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637919442 |
Product | transcriptional regulator |
Protein accession | YP_525855 |
Protein GI | 90020028 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.808324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCG ACCATATAGG TACATTTATA CGTAATTATC GCCAAACAAA TGGAGAAAGC TTACAAGCGC TGGCAGATAG GTCTGGTGTA AGTAGATCCA TGATTGCACA AATAGAAAGC AATCAGAAAA GTCCCACCGT TACCACCCTT GCCAAACTAG CAGGAGCCAT GAGCATAAGC TTGGGAGATT TAGTCGAACC CAGTAAACAC ACTACTCACT ACGTAATAGT TAAAGGCAGC AAAACGAACA TTGTCAGTAA ACAAAATAGC CCCTTCGTTT GTCACCAACT ACTCGCACAA AGTAACAGCT GCAATGTAGA CTTCTACCAT TTCTATTTTA GTAAATACGG TAAAACCGGC TTTGCAGCCA ATAAGCTGGG CACGCAAAAA ACAGTGTGGC TCGACACAGG CCAAATTACA CTACACCTTC ACAACGAAAC CATTTCACTT AATGCCGGGC AAGCCATTCA TTTTGCCGCC AGCACCCCCC ACCGCTTTGA AAACCGCAGC GGACCTTTAG CCAAAGGCTG TTTTACCGTA AGCTATAGCA ACTAA
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Protein sequence | MTFDHIGTFI RNYRQTNGES LQALADRSGV SRSMIAQIES NQKSPTVTTL AKLAGAMSIS LGDLVEPSKH TTHYVIVKGS KTNIVSKQNS PFVCHQLLAQ SNSCNVDFYH FYFSKYGKTG FAANKLGTQK TVWLDTGQIT LHLHNETISL NAGQAIHFAA STPHRFENRS GPLAKGCFTV SYSN
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