Gene Sde_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0379 
Symbol 
ID3967626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp467619 
End bp468173 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID637919442 
Producttranscriptional regulator 
Protein accessionYP_525855 
Protein GI90020028 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.808324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCG ACCATATAGG TACATTTATA CGTAATTATC GCCAAACAAA TGGAGAAAGC 
TTACAAGCGC TGGCAGATAG GTCTGGTGTA AGTAGATCCA TGATTGCACA AATAGAAAGC
AATCAGAAAA GTCCCACCGT TACCACCCTT GCCAAACTAG CAGGAGCCAT GAGCATAAGC
TTGGGAGATT TAGTCGAACC CAGTAAACAC ACTACTCACT ACGTAATAGT TAAAGGCAGC
AAAACGAACA TTGTCAGTAA ACAAAATAGC CCCTTCGTTT GTCACCAACT ACTCGCACAA
AGTAACAGCT GCAATGTAGA CTTCTACCAT TTCTATTTTA GTAAATACGG TAAAACCGGC
TTTGCAGCCA ATAAGCTGGG CACGCAAAAA ACAGTGTGGC TCGACACAGG CCAAATTACA
CTACACCTTC ACAACGAAAC CATTTCACTT AATGCCGGGC AAGCCATTCA TTTTGCCGCC
AGCACCCCCC ACCGCTTTGA AAACCGCAGC GGACCTTTAG CCAAAGGCTG TTTTACCGTA
AGCTATAGCA ACTAA
 
Protein sequence
MTFDHIGTFI RNYRQTNGES LQALADRSGV SRSMIAQIES NQKSPTVTTL AKLAGAMSIS 
LGDLVEPSKH TTHYVIVKGS KTNIVSKQNS PFVCHQLLAQ SNSCNVDFYH FYFSKYGKTG
FAANKLGTQK TVWLDTGQIT LHLHNETISL NAGQAIHFAA STPHRFENRS GPLAKGCFTV
SYSN