| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0369 |
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| Symbol | |
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| ID | 3967616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 456219 |
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| End bp | 458135 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919432 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_525845 |
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| Protein GI | 90020018 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG ATACATTAGA AAAACCACGC TTGAGTGATA CCGCACAGGT AGACAGTCAA
TCCATTGCGC CGTTTCCAAA TTCTAAAAAG ATCTACGTGC AGGGTAGTCG CCCAGATATT
CGCGTACCTA TGCGCGAAAT TAATTTATCT ATAACGCCAA CGGAATTTGG TGGCGAACAG
AATCCACCCG TGCGTGTTTA CGACACTTCT GGTGTGTACA CCGACCCCAA TGTAAAAATA
GATGTGCGCC AAGGTTTGCC CGATGTGCGC AGCGCTTGGA TAGCCGAGCG CGGTGACACC
GAAGTGCTGC AACAAAAAAG TTCGTCTTTT ACCCAGCAGC GCTTACACGA TGCAAGCTTG
GATACCTTGC GTTTTAATCA CCAGCGCCAG CCCCTTAAAG CCAAGCCGCG CGCAAACGTA
ACGCAAATGC ACTACGCGCG CTGCGGCATT ATTACCCCAG AAATGGAATA TATTGCCATT
CGCGAAAATA TGAGCTGGCA GCAAGCCAAA GAGCAAGGCG TGTTAGATCA GCAGCATGCC
GGCGAGCATT TTGGCGCAAA CATCCCAGAT GAAATTACAC CAGAATTTGT GCGCTCTGAA
GTGGCCTGCG GCCGCGCAAT TATTCCTGCA AATATTAACC ACCCCGAACT AGAGCCAATG
ATTATTGGCC GCAACTTTTT AGTAAAAATT AACGGCAATA TCGGCAACAG TGCGGTTACC
TCATCTATTG AAGAAGAAGT GGCGAAGTTA ACCTGGGGCA CGCGCTGGGG TGCCGATACC
ATTATGGATC TGTCCACCGG TAAAAATATT CACGAAACGC GCGAGTGGAT TATTCGCAAC
TCGTCAGTGC CCATTGGTAC AGTACCTATT TACCAAGCTT TAGAAAAAGT AGATGGCGTA
GCCGAAGATC TAACGTGGGA GATTTTCCGC GATACCCTCA TCGAGCAAGC AGAGCAAGGG
GTTGACTACT TCACAATCCA CGCCGGTGTA CTGTTGCGCT ATGTGCCGCT TACCGCTAAA
CGGGTAACAG GTATTGTGTC GCGCGGCGGC TCGATTATGG CTAAATGGTG CTTGGCGCAT
CACCGCGAAA ACTTTTTATA CACCCATTTC GAAGACATTT GCGAAATTAT GAAAGCTTAC
GATGTGAGCT TTTCTTTGGG GGATGGCTTG CGCCCAGGCT CCATTGCCGA CGCCAACGAC
GAAGCGCAAT TCGGCGAGCT AGAAACACTG GGCGAGCTTA CCAAAATTGC GTGGAAACAC
GATGTGCAGG TAATGATTGA AGGCCCAGGC CACGTACCAA TGCACATGAT CAAAGAAAAC
ATGGATAAGC AATTGCGCGA ATGTGGTGAA GCGCCGTTTT ATACCTTGGG GCCGCTGACT
ACCGATATCG CCCCAGGCTA CGACCATATT ACCTCGGGTA TTGGTGCGGC CATGATTGGC
TGGTACGGTT GTGCCATGCT TTGTTACGTT ACACCCAAAG AGCATTTGGG TTTACCCAAC
AAAGACGATG TAAAAGAGGG TATCATCACT TACAAAATTG CTGCCCACGC AGCGGATTTG
GCCAAAGGGC ACCCCGGCGC ACAGCTGCGT GACAACGCAC TCTCTAAGGC GCGCTTTGAA
TTCCGTTGGG AAGATCAGTT TAATTTGGGC TTAGACCCAG ATACTGCGCG GTCTTATCAC
GACGAAACGC TGCCAAAAGA TTCCGCTAAA GTTGCGCACT TTTGCTCTAT GTGTGGCCCC
AAGTTCTGCT CGATGAAAAT CACCCAAGAG GTGCGCGATT ACGCAGCAGA ACACGGTACA
GATATTACAC CAATCGCCGA AGATGAAGTG GTACGAATGA TTGATGTAGA AGCCGAAATG
CGCAAGAAGT CGGAGGAGTT CCGCGAGAAG GGCAGTGAGA TATATGGGAA AATCTAG
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| Protein sequence | MTTDTLEKPR LSDTAQVDSQ SIAPFPNSKK IYVQGSRPDI RVPMREINLS ITPTEFGGEQ
NPPVRVYDTS GVYTDPNVKI DVRQGLPDVR SAWIAERGDT EVLQQKSSSF TQQRLHDASL
DTLRFNHQRQ PLKAKPRANV TQMHYARCGI ITPEMEYIAI RENMSWQQAK EQGVLDQQHA
GEHFGANIPD EITPEFVRSE VACGRAIIPA NINHPELEPM IIGRNFLVKI NGNIGNSAVT
SSIEEEVAKL TWGTRWGADT IMDLSTGKNI HETREWIIRN SSVPIGTVPI YQALEKVDGV
AEDLTWEIFR DTLIEQAEQG VDYFTIHAGV LLRYVPLTAK RVTGIVSRGG SIMAKWCLAH
HRENFLYTHF EDICEIMKAY DVSFSLGDGL RPGSIADAND EAQFGELETL GELTKIAWKH
DVQVMIEGPG HVPMHMIKEN MDKQLRECGE APFYTLGPLT TDIAPGYDHI TSGIGAAMIG
WYGCAMLCYV TPKEHLGLPN KDDVKEGIIT YKIAAHAADL AKGHPGAQLR DNALSKARFE
FRWEDQFNLG LDPDTARSYH DETLPKDSAK VAHFCSMCGP KFCSMKITQE VRDYAAEHGT
DITPIAEDEV VRMIDVEAEM RKKSEEFREK GSEIYGKI
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