| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0344 |
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| Symbol | |
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| ID | 3964810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 428328 |
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| End bp | 429203 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919407 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_525820 |
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| Protein GI | 90019993 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.961814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.37345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAC AACTTACCGA CGACCAAATA AAAACCATCC TGCAAGGCAT TGCGATTCCG
CCGCAACCCC AGATACTAGT CGACCTGCAA ATGGAGCAAC TCGACCCCAA TTGCAGCGTG
CTCTCGGTGG CTAAGCTTAT TAGCCAAGAT GTAGGCCTGT CTGGCAGTAT CTTAAAAACG
GTTAACTCAT CTTTTTTTCA GCACGCAAGT AACATTACCT CTATAACTCA AGCGGTAAAC
CTGCTGGGCA TAAAAACCGT TGTTAACCTA GTAAACGCCC ACTCTATAAA AGGCGAGCTT
GCTGATGAAG ACATCATTGC CCTGGGGCGA TTCTGGGATA GCGCCATGGA GGTAGCCGCA
ACATCGGTAG TCATAGCCAA GCAAATTAGT ATGCAAAACC CCGATGAAGC CTACACTCTA
GGCTTGTTCC ACAATTGTGG TATTCCGCTG CTAATGAAAC GCTGCGACGA TTACCAATCG
GTAATACAGC AATGCTATGC CGAGCAAACC CTATCTATTA CCGAAAAAGA AAACGAACTA
ATACGCACAA ATCACGCGGT TGTAGGTTAC TACGTAGGCA AAGCCTGGAA CCTGCCAAAA
TATTTGTGCG AAGCCATTCA CGACCACCAC AACCCTATAA ACATCTTCAC CGATGAATTT
GCAGATAACC GCAAAAAGAA CCTGCTAGCA GTGCTAAAAA TGGCGGAATT TATATGTGGT
TGTCACGCTA CCATAGGCGG CCAAAGCGAA AATTATGAGT GGCACCAAGT AAAGCAATAC
GTTTTAGATT ACGTAGGTAT GACCGAGTAC GACTTCGAGA ACCTGCACGC CACCGTTATT
GAACTGGGAT TGGGCTCTAC CGATTACTAC AGCTAA
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| Protein sequence | MTAQLTDDQI KTILQGIAIP PQPQILVDLQ MEQLDPNCSV LSVAKLISQD VGLSGSILKT
VNSSFFQHAS NITSITQAVN LLGIKTVVNL VNAHSIKGEL ADEDIIALGR FWDSAMEVAA
TSVVIAKQIS MQNPDEAYTL GLFHNCGIPL LMKRCDDYQS VIQQCYAEQT LSITEKENEL
IRTNHAVVGY YVGKAWNLPK YLCEAIHDHH NPINIFTDEF ADNRKKNLLA VLKMAEFICG
CHATIGGQSE NYEWHQVKQY VLDYVGMTEY DFENLHATVI ELGLGSTDYY S
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