| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0341 |
|---|
| Symbol | |
|---|
| ID | 3966522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 424592 |
|---|
| End bp | 425788 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637919404 |
|---|
| Product | topoisomerase IV, subunit B |
|---|
| Protein accession | YP_525817 |
|---|
| Protein GI | 90019990 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000001862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.195257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTA GGAAGAAACT CTTTTTTGCG TGCGGCATAG GCTTAGCAGC TGCATCGGCC
CAAGCGGAAG TGACCTTTAA CGGGTTTGCG ACATTGGCTG GGGGGGTTGC AAGCATAGAC
GATGAACCAG GCCTTGATCT GAGTGCAGAT CCATTTTCAA GCCAGCCTAG CCGTTTATTT
GGGTACGACG ATCAGCTCGA CTATGAAAAC AACTCATTAC TCGCGCTGCA GGCATCTTCA
GATTTAGGTG ACGGCTTAAG TGCAACCGCT CAGGTTATTG CTCGCGGCTC AGACCAGTGG
AATGCAAAAT TAGCTTGGGC TTACATCGGT TATGAAATTA ACGACAACGT TAAACTTATA
GCCGGCCGTC AACGTATGCC ATTCTACGTA TTCTCAGATT ACCTAGATGT GAGCTACGCC
TACCACTGGA TTACCCCACC AGAAGGCGCA TACAGCCTAC CATTTGATTC AACAAATGGT
ATTGGTGCAA TTATTACTCA CCAGCTCGGT AGCGCCGACT CCACATTACA CTTTGTAACT
GGTCGCATTA AAGAAGACTT ACAACTCGAC CGACCTCGCG ACGCAGACCT ATCCGACATG
TACAGCGCAG CTTGGACACT TAACTTTTCA GACTTTTCTT TGCGTGCTGG CTACGCAAGT
GCAAACCTGC AGTACAGCGT ACCAGAGCTA GAGCCACTAG TAGCAAACTG GCAAACTGCC
GTTGGTCAAG ATTTTAGCGA ACAAATTCTT GCCAGCGACG AAGATAACAA GGGTAGTTTC
GTTGGCTTTG GTGCAACTTA CGATAATGGT AATTGGCTCG CCATTACTGA ATACACCGAA
ATTACGGTAG AGGGCACCAA CCTGCCTGCC AAACAAACAT CCTATTACTT CTCTTTAGGT
AAGCGCTTTG GCGATGTAAC TCCGCATATA ACTTACGGTG TAGACGAAAA CGAAGCTTCA
AGCACAAGCT TTATCGACCC ATATCGCAGT AATGCAGGTC TTGCTGAGTT AATTTTCACT
ACAGATGGTG TATTCAACAA CAAAGATTTA ATCGTCGATA ACGACTATGT TACTGCTGGT
ATTCGCTGGG ATTTCCACTC ATCGGCAGCT TTTAAAGTTG AGTACACAGT GCACAACGCC
AATCACTACG AACGTACTGA CAGCCTACTC CGCTTCGCAA TCAGCACCGT ATTCTAA
|
|---|
| Protein sequence | MNTRKKLFFA CGIGLAAASA QAEVTFNGFA TLAGGVASID DEPGLDLSAD PFSSQPSRLF
GYDDQLDYEN NSLLALQASS DLGDGLSATA QVIARGSDQW NAKLAWAYIG YEINDNVKLI
AGRQRMPFYV FSDYLDVSYA YHWITPPEGA YSLPFDSTNG IGAIITHQLG SADSTLHFVT
GRIKEDLQLD RPRDADLSDM YSAAWTLNFS DFSLRAGYAS ANLQYSVPEL EPLVANWQTA
VGQDFSEQIL ASDEDNKGSF VGFGATYDNG NWLAITEYTE ITVEGTNLPA KQTSYYFSLG
KRFGDVTPHI TYGVDENEAS STSFIDPYRS NAGLAELIFT TDGVFNNKDL IVDNDYVTAG
IRWDFHSSAA FKVEYTVHNA NHYERTDSLL RFAISTVF
|
|---|
| |