| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0339 |
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| Symbol | |
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| ID | 3966520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 423617 |
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| End bp | 424009 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919402 |
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| Product | glycine cleavage system protein H |
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| Protein accession | YP_525815 |
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| Protein GI | 90019988 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
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| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000111817 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.10942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAT TGCGAAGCGA ATTGAAATAC CTAGAGAGTC ACGAGTGGGC TCGAGTTGAA
GAAGACGGTA CGGTAACTAT TGGTATTACC GACCACGCTC AAGAAGCCTT GGGTGATGTA
GTGTTTGTAG AAGTGCCAGA GGTGGGCAGC CAAGTATCTA TTGGCGAAGA AGCCGGTGTG
GTTGAATCTG TTAAAGCTGC TTCCGATATT TACTCGCCCG TTTCTGGTGA AGTAATTGCC
GTTAACGAAG CCTTGGAAGA TGCCCCCGAA ACTGTAAACA GCTCGCCTTA CGACGATGGT
TGGTTCTTTA AAGTTAAGCC AGATGATTTA GATGAGCTAG AAAAAGCGCT TTCTATGGAA
GATTACAAAG CTGCTATTGA AAGCGACGAC TAA
|
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| Protein sequence | MSELRSELKY LESHEWARVE EDGTVTIGIT DHAQEALGDV VFVEVPEVGS QVSIGEEAGV
VESVKAASDI YSPVSGEVIA VNEALEDAPE TVNSSPYDDG WFFKVKPDDL DELEKALSME
DYKAAIESDD
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