| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0324 |
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| Symbol | |
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| ID | 3968592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 403488 |
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| End bp | 404639 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919386 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_525800 |
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| Protein GI | 90019973 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.645662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGT TTTATCAAAA AGTGGGAGTG GTTTCTATTG CGTTGCTTTT GCTTACCTTA
TTGGTAGGTG GCATATGTGT AGATCGCACA TTCCTAACTG CAAAATTTTT ACCGGCCGAC
AAAAGTACGT TTAATTGGCG ACCAGAAACC TGGGCCGATA AAGATATTGG CGGCGGGTCT
ACAGTAGTCA TACACGATGC AAAATACAGT TTAGATTTTG AATTCAAAAT GGCGAGCGCG
CTGGAATACC CATACGCCTC TATGGCCATT AGTATTTTAG ATGAAGACGG TGGCGAGCTG
CTTATTGATA TGTCTCGCTA TACTCGGCTT TCGTTTATGG TGCGCTGCGA ACCGCATAAT
ATTTTGTTTT TTGCCGCGCA CATGGTTGAT GAAGACGTAA CAGACCCAGA AGACCCATCC
AAATACAGAA GCCCTTCGTC GCATTTTTCC TGTGAAAAGG AATGGGCACA GGTACATATA
GACCTAACGC GCCTTAAAAC CCCGCAATGG TGGTTCGATA AATTTGGTTT AGATCTTTCT
CGCGAAGCCT ACAGGCTTAC CCAAGTATCT AAAATATCCA TAGGGGCAAC CCACCAAAGC
CCACAAGATG TAAGCTCCTT AGTAAAAATA AATGAGTTAA CAATGCACGG CCGCGATTGG
CGCTATATGT ATGCACTGGC GGTATGGGTA GTGCTGGTGT GGGGTGGTTT TATATTTTGG
TTGTTTAGGG CACACACAAA CGCACTTATT GCCGAATTAA AACGCAAATT TGAAAAAGAC
AGGCCCCTAA TTGCCTACCA GCAGTTATCT ATGCAACCGC AGCGAGCCAA AGAGCAAAGC
GATATTTTGC GCTATATGAC AACCGAATAT GCTAACCCAG AGCTTAACTT AGATTTAGCC
GTTACCCAGC TGGGGGTTAG CCGCACAAAA ATAAACGCAA TATTAAAAGA TGAAATTGGC
TACACCTTTA GCGCCTACCT TAACAAACTA AGGTTAACTG AGGCCGCAAG GCTGCTAACC
GAAAGTGATA GGGCCAACGT GGCAGAAATA GCCTACTCGG TGGGCTATAA CAATGTATCG
TATTTTAATA AGTTGTTTAA AACCGAATAC GGCTGTACCC CTAAAACCTT TAAGGATGTT
TACAAAGGCT AG
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| Protein sequence | MFKFYQKVGV VSIALLLLTL LVGGICVDRT FLTAKFLPAD KSTFNWRPET WADKDIGGGS
TVVIHDAKYS LDFEFKMASA LEYPYASMAI SILDEDGGEL LIDMSRYTRL SFMVRCEPHN
ILFFAAHMVD EDVTDPEDPS KYRSPSSHFS CEKEWAQVHI DLTRLKTPQW WFDKFGLDLS
REAYRLTQVS KISIGATHQS PQDVSSLVKI NELTMHGRDW RYMYALAVWV VLVWGGFIFW
LFRAHTNALI AELKRKFEKD RPLIAYQQLS MQPQRAKEQS DILRYMTTEY ANPELNLDLA
VTQLGVSRTK INAILKDEIG YTFSAYLNKL RLTEAARLLT ESDRANVAEI AYSVGYNNVS
YFNKLFKTEY GCTPKTFKDV YKG
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