Gene Sde_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0202 
Symbol 
ID3964780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp259070 
End bp259696 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID637919262 
Producthypothetical protein 
Protein accessionYP_525678 
Protein GI90019851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCC AACCGGTAAG AGATAAAATA TTACGCCGAA TACTGGAGTT CGAACCTGGC 
CAACCCATCG CATATCGAAA GCTGAAGGGG TATGGGTCCG GTTCCGCTAC TCAGAAATGG
CTCAAGCACT TTTGCCAGGC AGGCACCATA ACGCGGGCGA TGACCGGCTT TTACGTTCGC
CCAAAATCGA TAGCATCCTT GCCTAGCATC ACAGTGACTT GTGAGCCAGC GGCGTTGGCT
GAAGCTTGGG CTAAAGAGAA AGGTTACATC CTGACAACTA CAGACGTCGA AGAACTTTAT
CGACTACGGT TCCAAACACA AATGCCCATG CATACTCGGT TGTGGACAAA TGGCCCCAAC
AAAACCTTCA GGATCGGCAA TGCCGCCTTG TCCACTAGAA ACGTTCCTTC ATCAAAACTC
CTGTGGCACG ACATTCCACT TGGCCGCCTT TTTCGTGCGT TACAAGCCCT CAACCCAAAT
ACGACCAATC CGGAGAAGTT GGTGCGTGCA TTCAAGCTGC TTGGTCACTC TGAAAGTGAG
ACCCGTATTG GCCTCTCCAC ACTGCTCAAA GAGCCGTCCC TCGCCAAGTG GGCGCCAGCG
CTTCATGAGG CCAAAGATTC GATTTAA
 
Protein sequence
MSRQPVRDKI LRRILEFEPG QPIAYRKLKG YGSGSATQKW LKHFCQAGTI TRAMTGFYVR 
PKSIASLPSI TVTCEPAALA EAWAKEKGYI LTTTDVEELY RLRFQTQMPM HTRLWTNGPN
KTFRIGNAAL STRNVPSSKL LWHDIPLGRL FRALQALNPN TTNPEKLVRA FKLLGHSESE
TRIGLSTLLK EPSLAKWAPA LHEAKDSI