| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0184 |
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| Symbol | |
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| ID | 3967969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 232297 |
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| End bp | 234315 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919244 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_525660 |
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| Protein GI | 90019833 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCC TAAACCCCAG ACAAAAAGAA GCCGTTCACT ATATTGATGG CCCAAGCCTT
GTGCTTGCTG GCGCCGGCTC CGGTAAAACC AGCGTTATTA CCCGCAAAAT TGCCTATATG
ATTCAGGAAT GCGGTATTCC AGCGCGCCAT ATAGCCGCCG TAACCTTTAC CAATAAGGCG
GCACGAGAGA TGAAAGAGCG GGTAACCAAA CTGGTAAAAG GCAGCGCTGC TCGCGGCTTA
ACGGTTTCTA CCTTCCACAA TTTGGGCTTG AATATTATTC GCCGCGAACA CAAAACCTTG
GGGTTTAAGT CGGGTTTTAC CATTTTCGAC CAAGAAGACG CTCGCGGCCT TATTAAAGAA
ATAATGCTAA AAGACGGCGA TACCAACACC GATATGATCG ACTTGGTACA AAGCCAAATA
TCCAACTGGA AAAACGGCCT TATCGAACCC GACGAAGCGC TCTCTAAAGC GCAAAGCGAG
GGCGAGCAAA CTTGGGCGCT GGTTTTTGAA CGCTACAACA AGGCCCTAAA AGCCTACAAC
GCCGTCGATT TTGACGATCT TATCCGCTTA CCTTCTAAGC TTTTTTCGGA GCACCCCGAG
GTGCTAAACC GCTGGCAGCA GCGCATTCGC TACCTGCTGG TAGACGAGTA TCAAGATACC
AACTCCAGCC AGTACAAGGT GGTACAGCAA CTTATTGGCG ATAGAGGCAC ACTTACCGTG
GTGGGCGACG ACGATCAGTC CATCTACGCT TGGCGCGGCG CACGACCAGA AAATATGTCG
CTACTGAAGG TGGATTTCCC CAGCTTGCAT GTAATTAAGC TCGAGCAAAA CTACCGCTCC
ACGGCGCGCA TTCTAAAGGC TGCAAACGTG CTTATTGCCA ACAACCCACA CGAATTCGAC
AAAACCCTGT GGAGTGACCT GGGCATGGGC GAAACAATTC GTGTAATAAA GTGCCCCACT
GAGGATGCCG AAGCCGAGCG CGTTGCCACC GAAATACTTA CCCAAAGGCT GCGTCGCCAA
TGCAAGTTTA AAGACTTCGC CGTACTTTAC CGCGGCAACC ATCAGGCGCG CTTGATGGAG
CTAAAACTTC AACACCACCA AATACCCTAC AACATAAGCG GCGGCACCAG TTTTTTTGCC
CGCGCAGAGA TTAAAGACAT AATGGGTTAC CTGCGACTAA TCGCCAACCC AGCCGACGAC
AACGCTTTTT TACGCGTAGT GAACACCCCA CGCCGGCAAA TAGGCACCGG CACACTCGAA
GCCTTGGGCC GCTACTCTAC CGAGCGCGAC ATTAGCCTGT GGGCAGCGTG CGACGAAATG
GGGTTGCAGG CGCTCATCCC CAAGCAGGGC TTAGAGCGTA TTCGCAAGTT TTCGGGCTGG
TTAAATAGCG TGCGCAGCAA CTGCCACAAC GGCGACCCAG TGCAGGCTAT TCGCGAAATG
ATAGACGATA TAGATTACGA GGGCTGGCTG CACCAAAACG CTAGCTCGCC AAAAGTTGCA
GAGAAACGCT TCGAAAACGT GAACATTCTC GTCGAAAGTA TTAAAAACAG CCTCGAACGT
GACGAAAACG AAGACGCTGA CGGAGAAGAG CGCATCAACA CCGCCATATC CAAATTATTG
CTGCAGGATA TGCTGGAAAG ACAGGAAGAA GAAGACGAAA CCGATCGTGT TCAACTAATG
ACCCTGCACG CCTCAAAGGG CTTGGAATTC CCCCACGTAT TCTTATTGGG CCTAGAAGAA
GAAATTCTGC CCCACAGAAA CAGCATAGAA GAAGACAACA TAGAAGAAGA GCGCCGCCTA
GCCTACGTAG GCATTACCCG CGCCCAACGC ACACTCACCA TGACACTCGC CGGTACCCGC
AAACAATTCG GCGAAAAACA AACCACCACC CCCAGCCGCT TTTTAGACGA ACTACCACCG
GAAGACGTAG AAAGAGAAGG CTTTAGCGAA GCCACACCAG AACAAATAGA AAAGAAAGGC
AAAGAGACAC TGAGCTCTTT GAAGGGGATG TTTGATTAG
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| Protein sequence | MTTLNPRQKE AVHYIDGPSL VLAGAGSGKT SVITRKIAYM IQECGIPARH IAAVTFTNKA
AREMKERVTK LVKGSAARGL TVSTFHNLGL NIIRREHKTL GFKSGFTIFD QEDARGLIKE
IMLKDGDTNT DMIDLVQSQI SNWKNGLIEP DEALSKAQSE GEQTWALVFE RYNKALKAYN
AVDFDDLIRL PSKLFSEHPE VLNRWQQRIR YLLVDEYQDT NSSQYKVVQQ LIGDRGTLTV
VGDDDQSIYA WRGARPENMS LLKVDFPSLH VIKLEQNYRS TARILKAANV LIANNPHEFD
KTLWSDLGMG ETIRVIKCPT EDAEAERVAT EILTQRLRRQ CKFKDFAVLY RGNHQARLME
LKLQHHQIPY NISGGTSFFA RAEIKDIMGY LRLIANPADD NAFLRVVNTP RRQIGTGTLE
ALGRYSTERD ISLWAACDEM GLQALIPKQG LERIRKFSGW LNSVRSNCHN GDPVQAIREM
IDDIDYEGWL HQNASSPKVA EKRFENVNIL VESIKNSLER DENEDADGEE RINTAISKLL
LQDMLERQEE EDETDRVQLM TLHASKGLEF PHVFLLGLEE EILPHRNSIE EDNIEEERRL
AYVGITRAQR TLTMTLAGTR KQFGEKQTTT PSRFLDELPP EDVEREGFSE ATPEQIEKKG
KETLSSLKGM FD
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