| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0158 |
|---|
| Symbol | |
|---|
| ID | 3964792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 195752 |
|---|
| End bp | 196300 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637919217 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_525634 |
|---|
| Protein GI | 90019807 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGTA AATTGGTAAG CTGGTTGCGC CGCCGCAAGC GTCAAAAATA TATAGAAGGC
CTAGTGGCTA AGGGTTTAAA ACTTGGAAAC AATGTTCACA TTGTAGACCA GTGCTTTTGG
GACGCCGCCC ACTGCTACCT TATACAAATA GACGATAACG TTACTATCGC ACCAAACGTT
ACTTTTCTCG CCCACGACGC CAGCACAAAA GAATTTTTAA ATTACACAAA ACTTGGCAAA
GTTCATGTAA AAGAAAATTC TTTTATCGGC CATTCCGCAA TAATAATGCC CGGCGTAACT
GTTGGTAAAA ATACTATTAT TGGTTCGGGC TCTGTAGTAA CCAAAGACAT ACCCGATGGG
GTAATAGCCG CAGGCAACCC GGCACGTATT ATTACCACCT TAGAAAGTTA CTTAGAAAAA
GTAAAAGCTG ACGTAAGCGA AAACAATAAG ACTATATTTG GTCAAGACTA CCACATTTAC
AACTTAGACG ACCAAAAGCG CGCAGAACTA GTAAAAAGTG CAACCGGCAC AACCGGCTAC
ATCGATTAA
|
|---|
| Protein sequence | MIGKLVSWLR RRKRQKYIEG LVAKGLKLGN NVHIVDQCFW DAAHCYLIQI DDNVTIAPNV
TFLAHDASTK EFLNYTKLGK VHVKENSFIG HSAIIMPGVT VGKNTIIGSG SVVTKDIPDG
VIAAGNPARI ITTLESYLEK VKADVSENNK TIFGQDYHIY NLDDQKRAEL VKSATGTTGY
ID
|
|---|
| |