| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0151 |
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| Symbol | |
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| ID | 3965381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 187330 |
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| End bp | 188814 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919210 |
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| Product | ATP-dependent DNA helicase RepA |
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| Protein accession | YP_525627 |
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| Protein GI | 90019800 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.211461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TATGTCGAGG GGCGATTACT TGGGCTTTTA TGCTCATGGC TTTGAATTGC
TTGGCGCAGG ATTGCTCACT ACCAGAGCAT GGTGATTTGT TTGTCGACAA GGACTGGCAC
TCAGAAAATA ATTTTGTTGG CGAAATGGAT GGTAAATACC CTGAAACGGG TGTTGCTCCA
TTTCGAACAA TTCAGCAAAT GCTTGACGCG ATCCAACCTG GACAGTGTGG GTTTGTGAGG
GCTTCAGAAG AGCCTTACAT TGAGCTGGGT AAAAAGCCTG GTGAAGCCGT TGCTGGTAAT
ACCTTTATGC ATGGTGGTGA GTCTGAGGAG GCGCGGGTAA TTGTTTCCGG TTATCCTGGT
GAGCGGCCAG TAATTGATAT TCAACGTCAA CAGGATGGGG CTGGCCATGG CGTTGCAGGC
TTTCTTGTGG CTAGGGGCAA TTACATAACC ATCCGTAACT TTGAAATTAG AAATACGACA
AGTTCTGGCA TAATGATGCA TCATGCTAAT ACTAATGAAT ATATTACGGT TGAGAACTGC
CATATACATC ATAGCTATGG AGTGGATAAT ATTGCCGGAG TTAGATTGGA TTGGTGTATA
AATTGCCTAG TACGAAACAA TGTTATCCAT GATACCTACA AGATTGCCTC TTCAGATAAT
GTCACTACAG GTGAGCCGGT AATGTTTCAT TCTGGCGTTC ACGGCTATCG GCCAGGGAAC
ACAGTTATTG AACATAACTT GATTTATAAC GTTAAAAAAG GGGTGTATCA GAAAGAACCA
CATCCTGATG GGCTCAAAAG TAATGTCGTA AGGTACAATA TTTTTCATGA TATAGATGAA
GTGGTGTTCA TGTTGGGTAA CATGGGGGCG GGAATGACCC CTTCTTACGG GGCTGAGTTT
CATCACAATT TACTTTACAA CACTGAAGGT GGTGTAACCG CTAGCTTTTA TGAAGCGAAC
GGGACGTCAA CAGGCTTAAA GGTTTATAAC AATACTGCCG TAAATGTTAA AACATTTTTG
GGTATGTCAA ATGTTGTTGG TGTATCTCTC TACAATAATT TGTTTTATGA AATTGGGCCA
TACCCAGCTT TGATGGTTGA GAGACCAGGG GACGCACCAC GTAAAAATGG ATTCGATGAA
ATAGACTACA ATTTATATTA CAACACCCCA GTTCTATCTT ATTTGGATCG AAGTTTGAGT
ACCGATCAGA GGTTTTCAAC ACTAAGTGAT TGGAAGTTAG CAGCCGTTGA TCCTGTTCAT
ACGGTAGAGC TTCCGTCTAA AATCGAGCAA CATGGTGTAT ATGCCGACCC CAAATTCGTT
TCTCTAACTG ATCGTATTTT TACTCCGTTA TCTGGTAGCC CAGCAATTGC TGCAGGAAAA
GGAGGTAGCA CAATCGGGGC CTATGGAAAT GGCGTAAGAA TAGGCCCAGA TAGTACAATG
GTAGACGAAA AAATAGTAAA AATGAGATCA CCAAGTATTA ATTAA
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| Protein sequence | MKILCRGAIT WAFMLMALNC LAQDCSLPEH GDLFVDKDWH SENNFVGEMD GKYPETGVAP
FRTIQQMLDA IQPGQCGFVR ASEEPYIELG KKPGEAVAGN TFMHGGESEE ARVIVSGYPG
ERPVIDIQRQ QDGAGHGVAG FLVARGNYIT IRNFEIRNTT SSGIMMHHAN TNEYITVENC
HIHHSYGVDN IAGVRLDWCI NCLVRNNVIH DTYKIASSDN VTTGEPVMFH SGVHGYRPGN
TVIEHNLIYN VKKGVYQKEP HPDGLKSNVV RYNIFHDIDE VVFMLGNMGA GMTPSYGAEF
HHNLLYNTEG GVTASFYEAN GTSTGLKVYN NTAVNVKTFL GMSNVVGVSL YNNLFYEIGP
YPALMVERPG DAPRKNGFDE IDYNLYYNTP VLSYLDRSLS TDQRFSTLSD WKLAAVDPVH
TVELPSKIEQ HGVYADPKFV SLTDRIFTPL SGSPAIAAGK GGSTIGAYGN GVRIGPDSTM
VDEKIVKMRS PSIN
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