Gene Sde_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0099 
Symbol 
ID3965999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp122243 
End bp123493 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content48% 
IMG OID637919158 
Producthypothetical protein 
Protein accessionYP_525575 
Protein GI90019748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATGCG TATTAGATTC AACATTAGAG CGAACCGACG AAGAGGGATT TTTAACACGG 
CCGCGCTGGC TGGATGAGGA GCGATTACCC AATCGCGTGC TCGACCGCTT TTTAACTAAA
TTAGAAAGCG GTCAGCGTCT GTCCATGCGA GTTAACAGTA AAACCACCCC CGAGCTATTC
GATTTTCAAG ACGAAGATGT GCGCTACCAG TGGGAGTTGT TAAAAAGTCT CGACAAAGAA
TTTCATATTC TTAATATCAA GCTAGAGCGC AACAAAGCGC ACCAAGAAAG CTACGAAAAT
GCCCGCCTGT ATTTTAACCC CGATAAAGAA CCGCTCGTTC GCCATTGGCT AAACCGCCCA
GCTATAGACC CCTACGCGCT AGTGTGGGAA GCCGAGCTCG CGAAACAAAA ACACCATTTT
GACGATTACG GCCAAGCACT GTTCGAGCGC ATAGTACGCC TGCCCGATCG CGGCCCAGAG
CAAACCATTA AAGCCTTTGC CCGCATAGGC AAAGAGCTGC AAAAGCCCAT TACATTGCGT
GCGCTATCTG CCCGCTGCTT TTGGGGCGAT TCTAAATTTT TAGAGCACAA CGAACAATTG
GTGCGCGATT TATTTCCAAG CGTAGAGCAC AACATTTTAC CGCGCCCAAT ACTTATGTGC
GTTCACTTGC CCGAGCAGCT AGAGCATGTG TTGTTTGTAG AAAACCAAGA TACATTTTTG
GCTCTGGCCG CCGCCAACCT ACCTAACTAC GCACTGGTAT ATAGCGCCGG TTTTCGCGGC
AGCGCGCTAA GAATTCGCAC ACCGGGCAAC GCAGTGTTTA GCTTTATAAA CCACAGCAAT
AATGCAATTA AAGATGCGTT TGAAGCATGG TGGTTTGAAG CTAATACCAA GCATGCCAGT
AACAAAGATT CCAGTAACAA AGTAAGCACA ATAAACCCCA TTAAAACGTG GTTGTGGGGC
GATTTAGATT TTGCCGGCTT CACCATTTTA AAAGCACTGC GCCAAACATT TAGCACTATA
AAAGCGTGGC AACCGGGTTA CCTACCCATG TTAAATAAAT TAGAAACCGG TTGGGGCCAT
GGCCACGAAG AAAGCGGCAA AGGCCTACAA AAAGACCCAG AGCAAACCGG CTGCGAATTT
ACCGATACCG TACTATTACC TGCAATGCGC GAAGAGGGCG GCTTTGTGGA CCAAGAAGTG
GTGTCGCTAG AAGAGCTAAT GGCGGTGTTA GAGCACGGTG GCAGCGAATA A
 
Protein sequence
MGCVLDSTLE RTDEEGFLTR PRWLDEERLP NRVLDRFLTK LESGQRLSMR VNSKTTPELF 
DFQDEDVRYQ WELLKSLDKE FHILNIKLER NKAHQESYEN ARLYFNPDKE PLVRHWLNRP
AIDPYALVWE AELAKQKHHF DDYGQALFER IVRLPDRGPE QTIKAFARIG KELQKPITLR
ALSARCFWGD SKFLEHNEQL VRDLFPSVEH NILPRPILMC VHLPEQLEHV LFVENQDTFL
ALAAANLPNY ALVYSAGFRG SALRIRTPGN AVFSFINHSN NAIKDAFEAW WFEANTKHAS
NKDSSNKVST INPIKTWLWG DLDFAGFTIL KALRQTFSTI KAWQPGYLPM LNKLETGWGH
GHEESGKGLQ KDPEQTGCEF TDTVLLPAMR EEGGFVDQEV VSLEELMAVL EHGGSE