Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0075 |
Symbol | engB |
ID | 3967159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 96189 |
End bp | 96830 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637919134 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_525551 |
Protein GI | 90019724 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.611399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAA TCCACTTTCG CACTGCCCAA TTTTTAATCA GCGCCCCCAG TATTCGCCAA TGCCCTACCG AAGAAGGTAC AGAAGTGGCC TTTGCAGGAC GCTCCAATGC GGGTAAATCC AGCGCCATAA ACACCCTTAC CGGCAACGGT AAACTCGCCC GCACCAGTAA AACCCCCGGT CGCACCCAGT TAATTAACTT TTTTAACTTC CCTGCGGCGC CCGATCAACG CATTGTAGAC TTACCCGGCT ACGGCTACGC CAAAGTGCCA ATGGCTGTGA AGAAAAAATG GCAGGCCGAC CTTTCGGAGT ATTTGCAGCA GCGCGATGCA CTGCGCGGCT TGGTAATAGT GATGGATATT CGCCACCCTC TGCAGGACTT TGACACAATG ATGATCAACT GGGCAGTTGA AGGTGAAATG CCCGTACACC TATTGCTTAC CAAAGCCGAT AAGCTAAAGC CTGGGGCCGC TAAAAGCACC CTACTTGCGG TACAAAAACA TATGCGCGAT GCACAGGTAG ACGATTTGGT AAGCGCACAA ATGTTCTCTG CACTTAAGAA GCAGGGCATA AATCAGTTAG AAGACGTATT AAACGGCTGG CTGTTGCCGC AGCACGATGA GCCAGAAGCG GCGCAGGAAT AA
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Protein sequence | MAKIHFRTAQ FLISAPSIRQ CPTEEGTEVA FAGRSNAGKS SAINTLTGNG KLARTSKTPG RTQLINFFNF PAAPDQRIVD LPGYGYAKVP MAVKKKWQAD LSEYLQQRDA LRGLVIVMDI RHPLQDFDTM MINWAVEGEM PVHLLLTKAD KLKPGAAKST LLAVQKHMRD AQVDDLVSAQ MFSALKKQGI NQLEDVLNGW LLPQHDEPEA AQE
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