Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0065 |
Symbol | |
ID | 3967149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 80594 |
End bp | 81997 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919124 |
Product | NhaD family Na(+)/H(+) antiporter |
Protein accession | YP_525541 |
Protein GI | 90019714 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.249697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATT GCATTATTGT TATTTGGGCG GGTGTGTTGT TTTTGTTTCC TGCGCTCGCT TCTGCCGCTG CCAGCTCTCA TGTAGCTCTC GACCTTACTC ACCACTGGGT GGGGTTTGTT GCGCTTGCTA TATTTGTTGT GGCTTATACG CTGGTTATAT TTGAAGAGCA GCTGCATATG CGCAAGTCCA AACCGGTGCT GCTCGCGGCC GGGCTTATTT GGGTGCTTAT TGCCTTTGTT TACAGCGGCC AAAGCGATCA TCACAGTGCT GAAGAGGCCA TACGCCATAA CTTTTTAGAA TACGCCGAGC TATTCTTTTT CTTACTCGTG GCCATGACCT ATATAAACGC CATGCTAGAG CGTGGCGTTT TCGATAGCCT GCGCGATTGG CTAGTGCTTA AGGGCTTTAG TTACAAAAGT TTGTTTTGGC TTACCGGCTT TTTAGCTTTT TTTATATCGC CCGTAGCAGA TAACCTAACC ACCGCGTTAA TTATGTGCGC AGTAATTATG GCGGTAGGTA AAGACAAGCC CCAGTTTATT GCCATAGGTT GTGTGAACAT AGTTGTAGCC ACTAACGCAG GCGGTGCGTT TAGCCCCTTT GGCGACATTA CAACTTTAAT GGTTTGGCGA AAAGGTATTA TTGAGTTTTT TACCTTCTTT AATTTGCTAT TACCCTCACT GGTTAATTTT GTTATTCCCG CTGCAATTAT GCACCTTGCC CTACCCAGCG GGCAGCCAGC AGTGGTAGAG GATGAACCAG AGCAAATGAA AACCGGTGGT TTGGTTATTG TTGGCCTGTT TATTCTTACC ATTGTTACTG CGGTTAGCTT CCATAACTTT TTACACCTGC CCCCAGTATT TGGCATGATG ACAGGGCTTG CCTATTTAAA GCTGTTTGGC TATTACCTAC GTAAAAAGGG CCGATCTCAA TTTGACCATT CTGATATGCC AACTAACCAC AAAATTGAAG ACGACTTTGA TATTTTCGAC AAAATCGCTA AGGCCGAGTG GGATACATTG TTCTTTTTTT ACGGAGTAAT TCTTGCCGTT GGCGGCTTGG GCTTTATTGG TTACTTGGGT ATGACATCGG CATTTATGTA TGGTGAGCTT GGCCCTACAA CCGCGAATAT TTTAGTGGGC GTTATGTCTG CCATTGTGGA TAACATTCCC GTTATGTTTG CGGTATTAAC CATGAACCCC GCTATGAACG AAACTCAATG GCTGCTGGTA ACGTTAACGG CAGGCGTTGG CGGTAGCTTG TTATCTATTG GCTCTGCGGC AGGAGTGGCA CTTATGGGCC AAGCCCGCGG TTTTTATACT TTTTTTAGCC ACTTAAAATG GACACCCGCT ATTGCACTGG GCTACGGCGC AAGTATTTGG GTACATTTTT TAATTAATAG TTAA
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Protein sequence | MKHCIIVIWA GVLFLFPALA SAAASSHVAL DLTHHWVGFV ALAIFVVAYT LVIFEEQLHM RKSKPVLLAA GLIWVLIAFV YSGQSDHHSA EEAIRHNFLE YAELFFFLLV AMTYINAMLE RGVFDSLRDW LVLKGFSYKS LFWLTGFLAF FISPVADNLT TALIMCAVIM AVGKDKPQFI AIGCVNIVVA TNAGGAFSPF GDITTLMVWR KGIIEFFTFF NLLLPSLVNF VIPAAIMHLA LPSGQPAVVE DEPEQMKTGG LVIVGLFILT IVTAVSFHNF LHLPPVFGMM TGLAYLKLFG YYLRKKGRSQ FDHSDMPTNH KIEDDFDIFD KIAKAEWDTL FFFYGVILAV GGLGFIGYLG MTSAFMYGEL GPTTANILVG VMSAIVDNIP VMFAVLTMNP AMNETQWLLV TLTAGVGGSL LSIGSAAGVA LMGQARGFYT FFSHLKWTPA IALGYGASIW VHFLINS
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