Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0061 |
Symbol | |
ID | 3967145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 73913 |
End bp | 75874 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637919120 |
Product | prolyl oligopeptidase family protein |
Protein accession | YP_525537 |
Protein GI | 90019710 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.101557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTT CTAAACATCT AAAATGTTTG GCAATAGCTA TCGTTATTGC ATTTACTACT CATATACCAT TTTCCACCGC ACAAATTACC AACGCCGATT ACGCGGCCAA CCCATCGTTG CAGTGGGTGT CTGTTAGTCC ATCTGGTACG CGCTTAGCTT TTAGATACAC CACCGACGAG ATGGACCTAA TACGCGTGAT GGACCTTAAA GCAAAAAAAA TGCTAGCGGG TTTTCGGGTA GATGAGATTA CACCTCAGCA AATCTATTTT ATTGACGACG ATCGCATCGT ACTGGTTGCC AAAGAAGAAA AGCGCGTACA CGGGTTCAAA GGCATCATCG ATATGAGCTC TGCCTTTGTT TATTCCATTA AGAAAAATGC AATCCGTCAA TTGCTTATTC CCGGTGAAGT TGTTTACAAA GGGCAGAGCG GAATGGGCGA TATTGTTGGT CTTTCTCCCG ACGGTCAATT TGCTTACATG CCAGCTTTTG CTGAAAAAAG AATGGGTAGC AGTGCACCTA CTTATTCGCT GTTAAAAGTT TCTTTGGGTG CTAAGAAAAA GAAACCTAAA ATTATTCAAC ACGGTAATCG TCACACTATT GATTATTTTT TAGATGGCGA AGGTAATATT TTAGCCATAG AAAAATACAA TGAAGATAAA CACCTGTATA CCGTAGAGGT ACCAGACGGT AAAAAATGGC GAGTTATTTA CAGCGACGAT AGCGATCTAA GAGACTTTGG CATTTGGGGT ATAGCACCCG ACAAAAAGCA CTTAGTACTT GTAAACGAAG ACCCAGATAC AGGGTTTGAC ACTTGCTACA CGATGTCCTT AGAAGATGGC AAAATTTCGG GTAAGTTGTT TGGCCGTGCA GATAAAGATA TCGACCATAT TATTACCGAC ATTAATCGCG TTATTTACGG TGTGCGCTAC TCTGGTTTTA CGCCTACCTA TGAGTTTTTT GATAAAAAAC TTACAGAGCG CGTTGCTAAC ATTCAAAAAA AGTTTGAGGG CGAATCGGTT TTCTTACGTG ATTGGTCTGC CGATTGGAAA CACATTGTTG TGCAAACAAC TGGCACAGTA TTCTCTGGTG ATTATTTCTT GCTAAACGAC GGCGAGGCCA CGCCTATTTT TGTGGGTTCT AAATTTGAGA AATTTGGCTC TGAGCAAATT AACCCCATTG TAAAATATAA CTACAAAGCC AGAGATGAGC TGGATATACC AGTATTAATA ACATTACCGA GAAGCCAAAA AGATTCGCTT AAAAATTTAC CGGCAATAAT GATGCCCCAT GGTGGGCCTC GTCATCACGA TAAATTTGCT TTTGATTGGA TGGCGCAAGC ATTTGCTAAC GCTGGCTATG TTGTTATACA GCCACAATTT AGAGGTTCAG ACGGCTTTGG TTTAGCCCAC CTACTAGCAG GTAAAGGCGA GTGGGGCGGT AAGATGCAAA CCGACCTACT AGACGGTATA GATATGCTGG TTAAACAAGG TTTTATCAAT AAAGACAGAG TGTGTATTGT GGGCTGGAGT TACGGTGGCT ATGCGGCCTT AGCTGGCGGC GCATTTTATA GCGATTATTA CAAGTGTGTT GTGTCTGTTA ATGGCGTATC TGATGTGTAC GAAATTATGA AAGACGAAAA GCGAGACAAC CACCGCGTTT TCGATACTTA CGCTTATTGG AAGAGTGTAA TTGGAGAAGA CAAAATGGAT AAAGAATCGC TGGCAGCAAT TTCCCCCTCT AAATTTGCCG ATAACTTTAA TGTGCCGGTG TTGCTAATTT ATGGTGATAA AGACGAAGTA GTCGCCCCAG AGCAAACCAA AATTATGTAC AAAGCCCTTA AAAAAGCCGA TAAGCAAGTA GAAGTTATTC GTATGAAAGG CGAAGAACAC AGTTTTGATA ACCCAGAAAA CCGTGAAAAA ACCTTAGATG CGATAATAGA ATTTGTGAAT AAAAATATTT AA
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Protein sequence | MRLSKHLKCL AIAIVIAFTT HIPFSTAQIT NADYAANPSL QWVSVSPSGT RLAFRYTTDE MDLIRVMDLK AKKMLAGFRV DEITPQQIYF IDDDRIVLVA KEEKRVHGFK GIIDMSSAFV YSIKKNAIRQ LLIPGEVVYK GQSGMGDIVG LSPDGQFAYM PAFAEKRMGS SAPTYSLLKV SLGAKKKKPK IIQHGNRHTI DYFLDGEGNI LAIEKYNEDK HLYTVEVPDG KKWRVIYSDD SDLRDFGIWG IAPDKKHLVL VNEDPDTGFD TCYTMSLEDG KISGKLFGRA DKDIDHIITD INRVIYGVRY SGFTPTYEFF DKKLTERVAN IQKKFEGESV FLRDWSADWK HIVVQTTGTV FSGDYFLLND GEATPIFVGS KFEKFGSEQI NPIVKYNYKA RDELDIPVLI TLPRSQKDSL KNLPAIMMPH GGPRHHDKFA FDWMAQAFAN AGYVVIQPQF RGSDGFGLAH LLAGKGEWGG KMQTDLLDGI DMLVKQGFIN KDRVCIVGWS YGGYAALAGG AFYSDYYKCV VSVNGVSDVY EIMKDEKRDN HRVFDTYAYW KSVIGEDKMD KESLAAISPS KFADNFNVPV LLIYGDKDEV VAPEQTKIMY KALKKADKQV EVIRMKGEEH SFDNPENREK TLDAIIEFVN KNI
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