Gene Sde_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0058 
Symbol 
ID3965366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp71520 
End bp72305 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content51% 
IMG OID637919117 
ProductABC-type Mn/Zn transport systems, ATPase component 
Protein accessionYP_525534 
Protein GI90019707 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC CACTCATTCA GCTAAACAAT ATTCACCTGC GCTTTAGTGC AGAGCCAGTG 
CTAGAAGGCA TTAACCTCAC CATTCACCAG AGCGAGATTG TTACCATTAT TGGCCCCAAT
GGCGCAGGCA AAAGTAGCCT AGTAAAGGTA ATAACCGGCT TAATAGCACC AACCACGGGC
TCTATTACCC ACTGCGCACA GGGCAAACAG CCGCTGCGCA TAGGGTATAT GCCACAAACT
CTGCATTTAG ACCCAAGTAT GCCCATTAAG GTAAGCCGCT TTCTAAGCTT GGCCGGGCCA
AAGGCGCCTT CGCGCAGCGC CCGCAAGGCT GCATTGGAGC AAGTGGGCAT AGCCAATTTA
AGCAGTGCAC AAATGCACAA CCTTTCTGGT GGGGAGTTTC AACGGGTGCT GCTGGCGCGC
GCTATTTTAC AACGCCCCAA CCTACTGGTA TTAGATGAGC CACTGCAGGG TGTAGATGTA
AACGGCCAAA TAGAGTTGTA TCGGCTAATA GCCGAGTTGC GCCAGCAATT GCAGTGCGCC
ATTGTAATGG TATCGCACGA CTTACATTTG GTTATGGCGC AAACCGATTC AGTGGTGTGC
TTAAACCGTC ATATGTGTTG CCACGGCCAA CCCGAAAGCG TGAGCAAACA CCCCGAATAT
TTAAAATTGT TTGGCAAGCA AGCCAGCGAC GATTTAGCTG TTTATACCCA CAACCACGAT
CATCATCACG ATATGCATGG CGATGTGGTT GGCTGTAGCG ACGAGTGCGA CCATCACCAT
GATTAG
 
Protein sequence
MAAPLIQLNN IHLRFSAEPV LEGINLTIHQ SEIVTIIGPN GAGKSSLVKV ITGLIAPTTG 
SITHCAQGKQ PLRIGYMPQT LHLDPSMPIK VSRFLSLAGP KAPSRSARKA ALEQVGIANL
SSAQMHNLSG GEFQRVLLAR AILQRPNLLV LDEPLQGVDV NGQIELYRLI AELRQQLQCA
IVMVSHDLHL VMAQTDSVVC LNRHMCCHGQ PESVSKHPEY LKLFGKQASD DLAVYTHNHD
HHHDMHGDVV GCSDECDHHH D