Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0058 |
Symbol | |
ID | 3965366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 71520 |
End bp | 72305 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637919117 |
Product | ABC-type Mn/Zn transport systems, ATPase component |
Protein accession | YP_525534 |
Protein GI | 90019707 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCC CACTCATTCA GCTAAACAAT ATTCACCTGC GCTTTAGTGC AGAGCCAGTG CTAGAAGGCA TTAACCTCAC CATTCACCAG AGCGAGATTG TTACCATTAT TGGCCCCAAT GGCGCAGGCA AAAGTAGCCT AGTAAAGGTA ATAACCGGCT TAATAGCACC AACCACGGGC TCTATTACCC ACTGCGCACA GGGCAAACAG CCGCTGCGCA TAGGGTATAT GCCACAAACT CTGCATTTAG ACCCAAGTAT GCCCATTAAG GTAAGCCGCT TTCTAAGCTT GGCCGGGCCA AAGGCGCCTT CGCGCAGCGC CCGCAAGGCT GCATTGGAGC AAGTGGGCAT AGCCAATTTA AGCAGTGCAC AAATGCACAA CCTTTCTGGT GGGGAGTTTC AACGGGTGCT GCTGGCGCGC GCTATTTTAC AACGCCCCAA CCTACTGGTA TTAGATGAGC CACTGCAGGG TGTAGATGTA AACGGCCAAA TAGAGTTGTA TCGGCTAATA GCCGAGTTGC GCCAGCAATT GCAGTGCGCC ATTGTAATGG TATCGCACGA CTTACATTTG GTTATGGCGC AAACCGATTC AGTGGTGTGC TTAAACCGTC ATATGTGTTG CCACGGCCAA CCCGAAAGCG TGAGCAAACA CCCCGAATAT TTAAAATTGT TTGGCAAGCA AGCCAGCGAC GATTTAGCTG TTTATACCCA CAACCACGAT CATCATCACG ATATGCATGG CGATGTGGTT GGCTGTAGCG ACGAGTGCGA CCATCACCAT GATTAG
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Protein sequence | MAAPLIQLNN IHLRFSAEPV LEGINLTIHQ SEIVTIIGPN GAGKSSLVKV ITGLIAPTTG SITHCAQGKQ PLRIGYMPQT LHLDPSMPIK VSRFLSLAGP KAPSRSARKA ALEQVGIANL SSAQMHNLSG GEFQRVLLAR AILQRPNLLV LDEPLQGVDV NGQIELYRLI AELRQQLQCA IVMVSHDLHL VMAQTDSVVC LNRHMCCHGQ PESVSKHPEY LKLFGKQASD DLAVYTHNHD HHHDMHGDVV GCSDECDHHH D
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