| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0031 |
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| Symbol | |
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| ID | 3968164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 34108 |
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| End bp | 36165 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919090 |
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| Product | oligopeptidase A |
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| Protein accession | YP_525507 |
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| Protein GI | 90019680 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACC CTTTGTTAAA TCATCAGAAC TTGCCAGCAT TTTCTACTGT TAAGCCTGAA
CATGTGGTGA ATGCAGTAGA AACAATTATT AAAGAAAATG AGCAAACTTT AGCCGAAGTG
CTTGCGCAAG AGGGTACGCC AACCTGGGAA ACCCTAGTGG CACCCTTAGA TGAAAAAAGC
GATAAGTTAG ACAAGGCTTG GGCGGTAGTG AGCCATCTAA ACTCAGTAGC TAACAGTGAT
GAGTTGCGCG AAGCTTACGA GGCGGGGGAG CAATTGCTTA CCCAGTACTA TGCCAAAATA
GGTCAAAACA AAGCGCTTTA TCAAGCCTAC GAGGCGCTGG CCCAAGAGCC ATATTTTAGC
AGCCTCAGCC AAGCCCAAAA GCAAACTGTA GAAAATGCGC TGCGCAATTT TCGCTTAGCG
GGTGTTGCTC TAGAGGCCGA ACAGCAAGCG CGTTTTACCG AAATTCAATC TGAGCTATCT
AGCCTAACTA CACAGTTTGC CAACAACGTG ATGGATGCAA CGCAAGGTTG GTACAAACAG
GTAACCGACG AAGCACACTT AGCAGGTATT CCTGCAATGG CGAAAGAAGC TGCGGCCAAT
GCAGCCAAAA AGAAAGATGT GCAAGGCTGG GTATTCACAC TTGATATCCC GTCTTACTTG
GCAGTAATAA CTCACGCCGA TAACCGAGCG CTGCGCGAAG AAATGTACCG CGCGTTTGCC
ACCCGCGCCT CGAGCGAAAG CCCAGTAGCG GATGAGCAAA AAGCAAAATG GGACAACACC
CCGCTGATAG AAAAAATTCT TGCTCTGCGC TTAGAAAAAG CGCAACTGTT AGGGTTTAAT
AATTATGCCG AAGTATCTAT TGCTCCCAAA ATGGCAGAGA GCACCGAGCA AGTAATTGGC
TTTTTAGAAG ACCTAGCCGC AAAGGCCAAA CCACAAGCCG CAAAAGAGAA AGCTACACTT
GAGCAGTTTG CTAAAACCGA ACTCGGCCTA GATGAATTAA ACGCATGGGA TGTGGCTTAC
GCGTCGGAAA AACTAAAAGA AAAAACCTTT AACGTTTCAC AAGAAGCATT GCGTGAATAT
TTTCCGCTAC AAAAAGTACA GGCGGGTATG TTTACGTTGG TAGAGAAACT ATTTGATGTG
CGTATTCAAG AAAATACCGA ATCAGACACC TACCACCCAG ATGTAAGTTA TTTCGATATT
TATCGCAACG ATACGTTAAT TGCCAGTTTT TACTGGGATT TATTCGCCCG CGAGAAAAAA
CGCGGTGGCG CGTGGATGGC CGATGGCCGC ATTCGTCGCA AAACGGCAGA GGGCTTGCAA
AAACCGGTTG CATTTTTAAC CTGTAATTTT AATGGCCCCG TTGGCGATAA GCCTGCGTTA
TTAACCCACG ACGAAGTGAC CACATTATTC CATGAGTTTG GTCACGGCTT GCACCACATG
CTTACCCAAA TAGATATCCC AGCAGTAAGC GGCATTAATG GCGTAGCGTG GGATGCCGTT
GAGTTGCCCA GTCAATTTAT GGAAAACTTC TGCTGGGAAA AAGAAGTACT GCCGTTAATT
TCTGGCCACT ACGCCACCAA CGAACCTTTG CCAGAAGACA TGCTTAATAA CATGATTGCC
GGCCGTAACT TTCAATCGGC TATGCAAATG GTACGTCAGT TAGAGTTTTC TTTATTTGAT
TTTGTGTTGC ATAAAGATTT TGGCACTGAA CAATTTAGCG ATGTGCAAAG TGTGTTAGAT
ACTATTCGCG ATAAAGTTTC GGTAATTGTT CCACCCAGCT TTAATAAATT CCAAAACAGT
TTTACACATA TTTTTGCCGG TGGTTATGCG GCGGGTTATT ACAGCTATAA GTGGGCAGAG
GTGTTATCGG CCGATGCGTT CGCGGCGTTT GAAGAAGAAG GTGTACTTAA CGAAGCAACC
GGCAAGCGCT TTTTGCACAG TATATTAGAG CAGGGCGGTT CACAGCAGGC GATGGTATTG
TTTGAGAATT TCCGCGGTAG AAAACCCAGT GTGGACCCGC TTTTGCGCCA TTCTGGCATT
GTAGAGGTAG CAGCGTGA
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| Protein sequence | MSNPLLNHQN LPAFSTVKPE HVVNAVETII KENEQTLAEV LAQEGTPTWE TLVAPLDEKS
DKLDKAWAVV SHLNSVANSD ELREAYEAGE QLLTQYYAKI GQNKALYQAY EALAQEPYFS
SLSQAQKQTV ENALRNFRLA GVALEAEQQA RFTEIQSELS SLTTQFANNV MDATQGWYKQ
VTDEAHLAGI PAMAKEAAAN AAKKKDVQGW VFTLDIPSYL AVITHADNRA LREEMYRAFA
TRASSESPVA DEQKAKWDNT PLIEKILALR LEKAQLLGFN NYAEVSIAPK MAESTEQVIG
FLEDLAAKAK PQAAKEKATL EQFAKTELGL DELNAWDVAY ASEKLKEKTF NVSQEALREY
FPLQKVQAGM FTLVEKLFDV RIQENTESDT YHPDVSYFDI YRNDTLIASF YWDLFAREKK
RGGAWMADGR IRRKTAEGLQ KPVAFLTCNF NGPVGDKPAL LTHDEVTTLF HEFGHGLHHM
LTQIDIPAVS GINGVAWDAV ELPSQFMENF CWEKEVLPLI SGHYATNEPL PEDMLNNMIA
GRNFQSAMQM VRQLEFSLFD FVLHKDFGTE QFSDVQSVLD TIRDKVSVIV PPSFNKFQNS
FTHIFAGGYA AGYYSYKWAE VLSADAFAAF EEEGVLNEAT GKRFLHSILE QGGSQQAMVL
FENFRGRKPS VDPLLRHSGI VEVAA
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