| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0016 |
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| Symbol | |
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| ID | 3968835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 18822 |
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| End bp | 19310 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637919075 |
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| Product | hypothetical protein |
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| Protein accession | YP_525492 |
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| Protein GI | 90019665 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2862] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000152568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAAGT TTATTGAAGT AACAATGTAC CGTTCGCGCT GGTTACTGGC GCCTATATAT
TTGGGCTTGA GCTTGGCGGT ACTGGCGTTG GCCATTAAGT TTTTTCAGGA GCTAATACAC
CTACTTTTGC ATGTGATAGA CCTTAAAGAA GCCGATATGA TTTTGGTGGT GTTGAGTATG
ATCGACATTG CCATGGTAGG CGGGTTGCTA GTTATGGTGA TGATGAGTGG CTATGAAAAC
TTCGTTTCAC AGCTAAATAT TAGTGAAGAT GAAGAAAAGC TAAGCTGGTT GGGCAAAATG
GATTCTTCAT CACTTAAAGC CAAAATTGCC GCAAGTATTG TGGCTATTTC GTCTATCCAC
CTGCTTAAAG TATTTATGGC GGCGCAAACA ATTCCAAACG ATAAGTTGCT TTGGTATGTG
GTTATACACT TAACTTTTGT AGCGTCCGCG TTTGCTATGG GGTTTTTAGA TACTATTACT
AAAAAATAA
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| Protein sequence | MEKFIEVTMY RSRWLLAPIY LGLSLAVLAL AIKFFQELIH LLLHVIDLKE ADMILVVLSM
IDIAMVGGLL VMVMMSGYEN FVSQLNISED EEKLSWLGKM DSSSLKAKIA ASIVAISSIH
LLKVFMAAQT IPNDKLLWYV VIHLTFVASA FAMGFLDTIT KK
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