| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0009 |
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| Symbol | |
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| ID | 3968828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 10761 |
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| End bp | 12200 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919068 |
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| Product | PAS |
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| Protein accession | YP_525485 |
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| Protein GI | 90019658 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.304848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.553923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT ATTTGTTTAT AGCAAGCCAG TTATTTTTAT TTACCTACGC TTGCCAAGCG
CATGCGGGGT TTATGCATTA TTTTAAAAAC CCCGATGGCT CTACTAAGTG GCAACACATT
GCCAACTTTT CGAGCAGCGT TTTAATTTTA TTATTGTTAA TTACCGCTAT ATTTTTGTTC
TTTAGCGTAC GCCGCGCCCA CAAAGCTAAC AAAGAACTTA AATTAATACG CGACGATTTA
GAGCAGCGTG TAATAGAGCG TACAGCAACC TTAGACGAAT CTAACCGCCT ATTGCAACGC
GCCAACCAAA TGCTAGAAGG CGAAATAAGC CAGCACAAAG AAACCACTGC GCTTTTACAA
TCGTCTGAGG CTTACACCAA AAGCATTTTA GACTCTATGC CGCTAATGCT TATTGGACTG
AATAAAGACC TGGGTGTAAC CCAGTGGAAC AACTGGGCAG AAAAGTCCAC CGGTATACCA
GCAGATAAAG TTGTAGGCAA ATACCTTTGG GACGCTTACC CCACCATTAC CCTTACACCC
GATCAAATTA ACGAGGTGTT AGAAAAAGGT GAAACCGTCA CCATCAAACA CAGCCAACGC
GGCCAGTATT ATTTCGATAT TACTATTTAT GCCCTTAAAG GCCATCGCGA AACAGGCCTT
GTGGTACTGG TCGACGATGT AACCCAACAG AGCAAAGCCG AGAATTTGCT AATTCAACGC
GATAAGTTTT CTGCAATGGG TGAACTTGCA GCCGCCATGG CGCACGACAT TAATATACCG
TTGCGTGCCA TTGTGCGCGA TATTCACGAG TTGCGTGAAA ATATTAGTGG CGAAGAAATT
AGCCCGCGCA CACTTACGCG CTGGTTAGAC GACGCTAAAG AAAACAGCCG TCAAGCGTCG
GCCATTATTA GCCACCTGCT TGAATTCTCG AACAGCGAAA GCCAAGAGAA GCAGCTTACT
TCTATACCTA ATATTATTGA TCACTCGGTA TTAATTGCAG GCTCTATGTT CTCCGATACC
GATGGCCTGA AGTTTAAAGA TATTCAAATA GAACGCAATT ACGCTAGTGA CCTACCCCAA
GTACCTTGCC ATATTTCAGA ACTGCAACAG GTATTTTTAA GTTTGCTGCG CCACGCCTGT
TACTCGTTGG TTAAATCACC CAAGAAGAGC GAAAAGCCGA GCATCAATAT TTCGGTAAGT
GAATTCTACG ATTCCATGTG GATAAAAATT CAACACAATG GCCGTGGCTT AACAAGCGAC
GAGCAAATGA CCATATTCGA GCCCTTCTAC CAGAACGAAG CTATCTCGAA TGGTTGTGAC
TTAGAAAATC GTTTGTCGTT TTCTTATTTT ATTATTACCG AGCACCATCA CGGGCAAATG
GCTGTTACGT CCGATGAGAA TGTAGGCAGC ACGTTCCATA TTCAATTATT GCTGCGTTAA
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| Protein sequence | MKKYLFIASQ LFLFTYACQA HAGFMHYFKN PDGSTKWQHI ANFSSSVLIL LLLITAIFLF
FSVRRAHKAN KELKLIRDDL EQRVIERTAT LDESNRLLQR ANQMLEGEIS QHKETTALLQ
SSEAYTKSIL DSMPLMLIGL NKDLGVTQWN NWAEKSTGIP ADKVVGKYLW DAYPTITLTP
DQINEVLEKG ETVTIKHSQR GQYYFDITIY ALKGHRETGL VVLVDDVTQQ SKAENLLIQR
DKFSAMGELA AAMAHDINIP LRAIVRDIHE LRENISGEEI SPRTLTRWLD DAKENSRQAS
AIISHLLEFS NSESQEKQLT SIPNIIDHSV LIAGSMFSDT DGLKFKDIQI ERNYASDLPQ
VPCHISELQQ VFLSLLRHAC YSLVKSPKKS EKPSINISVS EFYDSMWIKI QHNGRGLTSD
EQMTIFEPFY QNEAISNGCD LENRLSFSYF IITEHHHGQM AVTSDENVGS TFHIQLLLR
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